Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4211 ATGTTATTTGACTTTATAGGGGAAATGCCAAAACCTGCATCCTCAGACACAACAATGATTGATATAACTTCTCTCCTGGGTGGTTTGTTCTATACATGGGTCATCCTTCAACTGTTTCCTGTTATTCTGATATCGTTGGTGTATGAGAAGCAGCACAAAATAAGAATGATGATGAAAATGCATGGTCTTGGAGATGGACCATACTGGTTGATTTCCTATGCTTATTTTCTTGCCATTTCCATGGCCTACATGCTGTGCTTTGTGTTAATGGGTTCATTCTTTGGATTCCATTTCTTCAGAGAGAATAACTATGGAATCCAGTTCGTGTTTTATTTTATCTATGTAAACTTACAAATTGCCTCCGCGTTTCTGGTGGCTGCCCTGTTTTCGAATGTTAAGCCTGCTACAGTTACAGCATATATAGTTGTCTTTGGAACTGGACTGGTAGCTGCCTTTCTTTTCCCAGATTTGCTGAAGAATGATCTATTTCCAAAAAAATGGATCATTGTTATCGAGTTTTATCCTGGGTTTGCTTTATTTCGCGGGCTAAATGAGTTTGCAGAATATGTCAGTGTTGGAAATAGTTCAGGGACCCTTGGCATGAGGTGGCAGGATCTGAATGATAGCACAAATGGCATGAAACAGATCTTAATCATCATGTCAATTGAGTGGATAGTTTTTCTTTTTGTTGCTTACTACCTTGATCAAGTTTCCTCATCAGCAAGTGGGAGAAGTCCATTTTTTTTCTTGAAAGGATTCCAGAAGAAGACACCTTTGTCTTCCCAAAACGACAATATGCCAATGCAGGGGTCAAGAGCCTTGGCTCAGATGGATAAACCTGATGTAATCCAAGAGAGGGAGAAAGTGGAGGAGCTGCTACTTGAACCGGCCGGCAATCACAGAATAGTTTGCAACGAGCTGAGAAAAGTCTATCAGGGAAGGGACGGAAACCCGGATAAAGTAGCAGTGAGAGGGTTGTTCCTTGCTGTTCCTCAAGGGGAATGCTTTGGCATGCTTGGTCCCAATGGTGCTGGAAAGACTTCTTTTATTAGTATGATGATTGGTCTGACAAAGCCAACCTCTGGTACTGCATTTGTTCAAGGCATGGACATAAGAACTGATATGAATGGACTATACACAAGCATGGGTGTATGCCCCCAACATAACTTGCTGTGGGAAAGGTTGACAGGAAGAGAGCACCTACTTTTCTATGGCAGACTTAAAAACCTCAAAGGTTCAGCCTTAACACAGGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTCAATGGAGGAGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGCGTTGCAATTTCTTTGATTGGGAATCCCAATGTTGTTTACATGGATGAGCCAAGCACCGGATTGGACCCTGCATCAAGAAAACGCTTATGGGATGTTATTAAGACTGCCAAAAAGGATCGTGCAATTATTCTCACTACTCATTCCATGGAAGAGGCAGAGGCCTTGTGTGATCGATTAGGAATCTTTGTTGATGGTAGCTTGCAGTGCATAGGAAATTCAAAGGAGTTGAAAGCAAGATATGGAGGAACTTATGTGTTGACAATGACAACACCTTGGGAGCATGAAAAGGAAGTGGAGAACATGGTACGGCTGCTATGTCCTAATGCTAACAAGATATACCATATTTCTGGGACTCAGAAGTTTGAGCTGCCTAAAGGGGAGGTTAGAATAGCTGATGTATTTGGAGCTGTTGATTTTGCAAAGAGAAACTTCACTGTTTCTGCATGGGGTTTAACTGACACCACAATGGAAGATGTCTTCATTAAGGTTGCTCGTGGCGACCCCCATTCTCAAAACCTGTCATAA 1875 0.4187 MLFDFIGEMPKPASSDTTMIDITSLLGGLFYTWVILQLFPVILISLVYEKQHKIRMMMKMHGLGDGPYWLISYAYFLAISMAYMLCFVLMGSFFGFHFFRENNYGIQFVFYFIYVNLQIASAFLVAALFSNVKPATVTAYIVVFGTGLVAAFLFPDLLKNDLFPKKWIIVIEFYPGFALFRGLNEFAEYVSVGNSSGTLGMRWQDLNDSTNGMKQILIIMSIEWIVFLFVAYYLDQVSSSASGRSPFFFLKGFQKKTPLSSQNDNMPMQGSRALAQMDKPDVIQEREKVEELLLEPAGNHRIVCNELRKVYQGRDGNPDKVAVRGLFLAVPQGECFGMLGPNGAGKTSFISMMIGLTKPTSGTAFVQGMDIRTDMNGLYTSMGVCPQHNLLWERLTGREHLLFYGRLKNLKGSALTQAVEESLKSLNLFNGGVADKQAGKYSGGMKRRLSVAISLIGNPNVVYMDEPSTGLDPASRKRLWDVIKTAKKDRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNSKELKARYGGTYVLTMTTPWEHEKEVENMVRLLCPNANKIYHISGTQKFELPKGEVRIADVFGAVDFAKRNFTVSAWGLTDTTMEDVFIKVARGDPHSQNLS* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4211 624 PANTHER OS08G0398300 PROTEIN 1 616 - -
Amo01g4211 624 ProSitePatterns ABC transporters family signature. 441 455 IPR017871 GO:0005524
Amo01g4211 624 Pfam ABC-2 family transporter protein 22 233 - -
Amo01g4211 624 Gene3D - 295 561 IPR027417 -
Amo01g4211 624 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1 616 IPR026082 GO:0016021|GO:0055085|GO:0140359
Amo01g4211 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 530 IPR027417 -
Amo01g4211 624 CDD ABC_subfamily_A 302 527 - -
Amo01g4211 624 Pfam ABC transporter 328 468 IPR003439 GO:0005524
Amo01g4211 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 302 539 IPR003439 GO:0005524
Amo01g4211 624 SMART AAA_5 332 515 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4211 Amo-Chr1 117716470 117721676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g4211 306 550 Calmodulin-binding Proteins AT2G36910 24.903 5.50e-15 77.0