Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4209 ATGCATAATTTACAGAGTGAAGTAAATCATCTTGGACAACTTCATCATCCAAATCTAGTGAGACTTATTGGATACTGTTTTGAAGGGGATAATCGACTTCTGGTGTATGAATACATGCCAAAAGGAAGCTTAGAAAATCACCTATTTCATAAGGGGAATGAAACGCTTCCTTGGACAACAAGAATGAAAGTTGCTATTGATGCTGCTAGAGGACTAACCTTCCTACATGAATCTGAGCAACAAGTCATCTACCGAGACTTCAAGACTTCTAACATTTTATTAGATTTGGAATTTAATGCAAAACTTTCAGATTTTGGATTGGCGAAAGCAGGGCCCATTGGTGATCTAAGTCATGTTTCTACTCAAGTCTTGGGCACTGTAGGTTATGCTGCTCCTGAATATATCCTTACAGGTCGGCTAACTACAAAATGTGACGTGTATAGTTTTGGAGTAGTACTATTGGAATTACTAACTGGAAGGCGTGCAATTGAGGTAACAAAATCTGGGATGGAACATAATCTTGTGGAATGGGCAAAACCCTATTTGGGTGATAGGAGGAAGTTGTTCAGGATCATGGACACTAAGTTAGCAGGACAATACTCACAAAGGGCAGCTTATATAGTTGCTCTTCTTTCTTTGCAATGCATTAGTGAGCCCAAGTTCAGGCCTCAGATGCTTGATATTTTATCTACTTTAGAAAGGCTTCCGCTAACTAGTAATAACCACTCACATAGGGCCAAGACTAGGCCCATCTCATCAAGCCCAAGTAATAATGATAATTATTATTCACCATACAACACCGGCAGGTCACCCCTCTTGCAACCCACGCATCATTATTAA 840 0.3976 MHNLQSEVNHLGQLHHPNLVRLIGYCFEGDNRLLVYEYMPKGSLENHLFHKGNETLPWTTRMKVAIDAARGLTFLHESEQQVIYRDFKTSNILLDLEFNAKLSDFGLAKAGPIGDLSHVSTQVLGTVGYAAPEYILTGRLTTKCDVYSFGVVLLELLTGRRAIEVTKSGMEHNLVEWAKPYLGDRRKLFRIMDTKLAGQYSQRAAYIVALLSLQCISEPKFRPQMLDILSTLERLPLTSNNHSHRAKTRPISSSPSNNDNYYSPYNTGRSPLLQPTHHY* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4209 279 MobiDBLite consensus disorder prediction 240 279 - -
Amo01g4209 279 SUPERFAMILY Protein kinase-like (PK-like) 3 262 IPR011009 -
Amo01g4209 279 Pfam Protein tyrosine and serine/threonine kinase 3 179 IPR001245 GO:0004672|GO:0006468
Amo01g4209 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 82 94 IPR008271 GO:0004672|GO:0006468
Amo01g4209 279 PIRSF ILK 1 250 - -
Amo01g4209 279 PANTHER OS01G0588500 PROTEIN-RELATED 3 258 - -
Amo01g4209 279 Gene3D Phosphorylase Kinase; domain 1 1 39 - -
Amo01g4209 279 PANTHER BNAC02G17010D PROTEIN 3 258 - -
Amo01g4209 279 MobiDBLite consensus disorder prediction 240 273 - -
Amo01g4209 279 Gene3D Transferase(Phosphotransferase) domain 1 40 257 - -
Amo01g4209 279 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4209 Amo-Chr1 117689186 117690934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g4209 7 232 Glycoside Hydrolase AT3G07070 54.310 3.61e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo01g4209 PK_Tyr_Ser-Thr 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4209 - - adu:107470619 456.447