Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4201 ATGTTCAAGATCGTTGCCAGCAGAGCGAGGGCTTCAACTCCACATGCCCGCAACGCTCTACTTTCTTACAATGTCTCTCGGTCTGGTCATGCTCTATCATCTGCCACAGTAGAAGCCGAAGAGATATCAGGTTCTAGACCTGCTGAAGTTTTGAACTTGGTTCAGGGTAAATGGGTCGGAGCTTCAAAGTGGAACACAATTGTGGARCCGCTAAATGGAGACCCCTTTATTAAAGTTGGRGAAGTTGATGAAACAGGCCTTCAGCCCTTTGTGGAAAGTTTGGCCAGCTGCCCCAAGCATGGTCTGCACAATCCGTTTAAGGCTCCTGAGAGATATCTTATGTTTGGAGATATATCTGCTAAGGCAGCTCACATGCTATCACTCCCTAAGGTTTCAGATTTCTTTGCAAGGCTAATACAGAGAGTTTCTCCCAAGAGTTATCATCAGGCCTGTGCAGAAGTTTATGTGACACAAAAGTTTCTAGAGAATTTCTGCGGTGATCAGGTTCGTTTCCTGGCAAGGTCTTTTGGGGTGCCTGGAAATCATCTTGGGCAGCAAAGTCACGGTTTCCGTTGGCCATATGGTCCGGTGGCTATTATTACTCCTTTCAATTTTCCATTAGAGATTCCAGTCCTTCAACTGATGGGTGCACTTTACATGGGCAACAAGCCAGTTCTTAAAGTTGATAGCAAGGTAAGCATTGTCATGGAGCAAATGTTGCGTCTGCTTCACACATGTGGTTTACCTGTAGAAGACGTAGACTTCATAAATTGTGACGGGAAGACAATGAACAAGCTGTTGCAGGAGGCAAATCCAAGAATGACCCTTTTCACTGGTAGTTCAAGAGTGGCAGAGAAATTGGCTGTTGATCTGAAGGGCCGGATTAAATTGGAAGATGCTGGATTTGATTGGAAAATACTGGGCCCTGATGTTGACCAGGAAGATTATGTTGCATGGGTCTGTGACCAGGATGCTTATGCATGCAGTGGTCAGAAGTGCTCAGCACAATCATTATTATTTATGCATGAGAACTGGGCTTCTACTTCCTTGGTATCCAAATTGAAAGGTCTTGCTGAGAGAAGAAAGCTAGAGGACTTGACAATTGGTCCAGTTCTCACTTTTACAACTGAATCAATGATGGATCACATGAAACAATTACTTGAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCAAGCCTTTAGAGGGTCATTCTATTCCACCTATTTACGGTGCTATTAAGCCCACTGCTATTTATGTTCCCCTTGAGGAAATTGTGAAGGACAAGAATTATGAGCTTGTGACAAAAGAAATTTTTGGACCTTTCCAGATAATTACTGACTACAAAAGCAGTCAACTACCAACTGTGTTGGATACATTGGAAAAAATGCATGCACATTTAACTGCTGCTGTAGTTTCAAATGATCCTCTCTTTTTACAGGAAGTCATTGGTAGATCAGTGAATGGTACAACTTATGCTGGTCTAAGAGCAAGGACTACTGGAGCTCCACAAAACCATTGGTTTGGACCTTCTGGAGATCCTAGGGGTGCTGGAATCGGAACACCAGAAGCTATAAAACTAGTATGGTCTTGCCACAGAGAAGTTATATATGATTATGGTCCAGTACCAAACCGTTGGGAAATTCCTCCATCAACATGA 1659 0.4346 MFKIVASRARASTPHARNALLSYNVSRSGHALSSATVEAEEISGSRPAEVLNLVQGKWVGASKWNTIVEPLNGDPFIKVGEVDETGLQPFVESLASCPKHGLHNPFKAPERYLMFGDISAKAAHMLSLPKVSDFFARLIQRVSPKSYHQACAEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINCDGKTMNKLLQEANPRMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKILGPDVDQEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWASTSLVSKLKGLAERRKLEDLTIGPVLTFTTESMMDHMKQLLEIPGSKLLFGGKPLEGHSIPPIYGAIKPTAIYVPLEEIVKDKNYELVTKEIFGPFQIITDYKSSQLPTVLDTLEKMHAHLTAAVVSNDPLFLQEVIGRSVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTPEAIKLVWSCHREVIYDYGPVPNRWEIPPST* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4201 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 302 IPR016162 GO:0016491
Amo01g4201 552 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 25 551 - -
Amo01g4201 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 303 493 IPR016163 GO:0016620
Amo01g4201 552 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Amo01g4201 552 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 25 551 IPR044638 GO:0004029
Amo01g4201 552 Pfam Aldehyde dehydrogenase family 122 494 IPR015590 GO:0016491
Amo01g4201 552 SUPERFAMILY ALDH-like 52 518 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4201 Amo-Chr1 117546410 117553532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g4201 1 552 Aldehyde Dehydrogenase Gene Family AT5G62530 78.777 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4201 K00294 - gmx:100806579 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g4201 01 117546410 117553532 Amo11g2182 11 120045553 120052611 hybridization