Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4132 ATGACAGAGAAGAAAACATATTCTTTTTGTGGCTTCCTATTGCTTTCTCTCTTCGTCCTTCTTTCAGTTGAAGTTATTGTTGGTGAGGATTCTTTGGAAACTGATAAACAAGTTCTTTTGGAGTTGAAAGCATATCTTGATAGCAAAACACTTGAAGACCATGGAAATTATGTGTATTGGAACAGAAGCACTAGTCCATGTGAATGGCCAGGAATATGGTGCACCCACATCAATGGAACCACCAATAGGGTGGTTGGAATAGACCTCTCGGGCAGCGAAATCACCGGCGAGATTTTCAACAACTTCTCAATGCTAACTGAGCTGACACACCTTGATCTGTCTCAGAACACACTCTTCGGTGACATTCCTGAAGATCTAAGGCATTGCCAGAAGCTCATTCATCTCAACATCTCACATAACATTCTTGCTGGTGAGTTGAACTTGACAGGTTTCAGAACATTGAAGACTCTGGACTTGTCTGTGAATAGGCTTCATGGCGAGATTGGCGTGAATCTTTTCGCCGGCGCCTGCAATGCCTTGGTTACTCTCAATGTCTCAGGGAATAACTTGACTGGTGGAATTGGTGGCTGGCTTGATCAGTGTCCTATGCTGCAGAACTTGGATTTGAGCACAAACAATCTGAGTGGAGGATTAGGGAACGGTTTCGCCAGGCTGAAGGAGTTTTCGGTTGCAGAAAATCATCTCAGTGGGAATGTTTTATCAGAGGCATTTCCCCTGGATTGTAGCCTTGTGGAACTAGACCTTTCGCTGAATGGTTTCGTTGGCGAGGCGCCAAAGGGTGTTGCAAACTGCAAGAATCTAACAATTCTGAATCTTTCCAGCAACAATTTCTCTGGTGGAATCCCAATTGAGATAGGATCAATCTCAGGCCTAAAAGGATTGTACTTGGGGAACAATAGCTTCTCAAGAGATATACCTCAGAATCTTTTGAATCTTGCCAATTTGGTTCTTTTGGATTTGAGCAGAAACAATTTTGGTGGGGAAGTTCAAGAAATTTTTGGGGAATTTAAGCAACTGAGCTTTCTTGTGTTGCACTCAAATCACTACACTGGAGGATTGATTTCCTCAGGGATCCTTAAACTGCCAAAAGTTTCGCAATTAGATCTAAGCTTCAACAACTTTTCAGGTCCATTGCCTGTTGAGATCACTCAGATGGCAAGCCTTCAGTTCTTGATGTTGTCCTACAACCAGTTCAGCGGTCCAATTCCGGCCGAATTTGGAAACATGGCTCACCTTCAAGCACTAGACCTTGCCTACAACAATCTGAATGGTTCAATCCCACCAAGCCTTGGCAAAATGAGTTCCCTCTTATGGCTAATGCTGGCGGACAATTCGCTAAGCGGCGAAATCCCACCGGAGTTGGGAAACTGCACAAGCTTGTTATGGTTGAACCTTGCAAACAACAAGTTGAGTGGGAATTTGCCTCCTGAGTTGTCCAAGATTGGAAGGAATGCAATGACAACATTCGAATTGAATCGAAAAAGTGAGCAAATCCTTTCTGGCTCAAGTGAGTGCCTTGCAATGAGAAGATGGATGCCGGCAGATTATCCTCCATTCAGCTTTGTGTATAGTATCTTGACAAGGAAGAATTGTAGGGGACTCTGGTACAAACTCCTCACAGGAAATGGCATTTTCCCATTTTGCCCCCCAGGCGCCTCGCTTAGCAAGCCTCAGATATCAGGCTATGTTCAGCTGAGTGGGAACAATCTTTATGGAGAGATTCCTTCAGTGATTGGAACAATGGTGAATTTCAGCATGCTGCATTTGGGATTCAACAATTTCTCTGGAAAGTTCCCTGCTGCAATGGGTACTATGTCACTTGTGGTTTTAAACATCACCATGAACAAATTCTCAGGTGAAATTCCAAGTGAAGTTGGAAACATGAGATGCCTTCAGAATCTTGATTTTTCTTCCAACAATTTCTCAGGGCAATTTCCAACAAGTCTGAACAGTTTAACTGAGCTTAACAAGTTCAATATATCATTCAATCCCTTAATAACTGGTGTAGTTCCATCAACTGGACAATTTGTTACATTTGACATGAATTCATATCTAGGTGACCCTCTATTAGTCCTTCCAAACTTCATTTACAACATCACAGGTGATAAGAACACAACCTTGCACAAATACCATAAGAAGGAATCAAAGTTGTCTGTGTTCTTGGGTTTTGCAGCTATAACACTGGCTTTCATGGTGTTTGGTCTTCTTACAATTATAGTCTGCGCATTGAGGAAAAGTCCCTTGGAAGATCCTGGATACCTCTTGAGGGAAGCTAAACAATCTCATGATTCAAGCAGCTCTGCATCCTCACCATGGTTATCAGACACAGTTAAGGTAATCCGGTTAAACAAGACGGCTTTTACACACGACGATATCTTGAAGGCCACTGGAAACTTCTCAGAGGACAGGATCATAGGAAAAGGAGGATTCGGAACGGTTTACAAGGGAGTTTTTCAAGATGGAAGAATTGTTGCAGTGAAGAAGCTTCAAAGAGAAGGAATCGAAGGCGAAAAGGAGTTTAGAGCAGAAATGGAGGTTCTGAGTGGTCATGGATTTGGTTGGCCTCATCCAAACCTTGTCACGCTCTATGGATGGTGCTTAAATGGTTCAGAAAAGATACTAGTTTATGAGTACATAGAAGGTGGAACATTGGAGGATCTAATCACTGATAGAACAAGTTTTACATGGAGAAGAAGATTAGAAGTTGCAATTGATGTTGCAAAAGCACTAGTCTATTTGCACCATGAATGTTATCCGCCAATTGTTCATAGAGATGTTAAAGCTAGCAATGTGTTATTGGAAAAAGATGGAAAAGCAAAAGTCACAGATTTTGGATTAGCAAGAGTTGTTGATGTTGGAGATAGCCATGTTAGTACAATGGTGGCTGGAACAGTTGGTTATGTTGCACCAGAATATGGACAAACATGGCAGGCTACAACAAAAGGTGATGTGTATAGTTTTGGAGTGCTGGCTATGGAGTTGGCCACAGGGAGAAGAGCAGTGGATGGAGGTGAAGAGAGCTTGGTGGAGTGGGCGTGGCGTGTTGTCGGACGCGGACGGCTTGGCCGGGCCCTACCGGTTTCAGTGATGGGGTCAGGGCTTGTTGGTGGTGCAGAAGAGATGAGTGAAGTGCTTAGAATTGGTGTGAAGTGCACTGCTGAGGCACCATATGTTAGGCCTAATATGAAGGAAGTTCTTGATATGTTGATTGGGATATACTACTCCAAAGGTTATCCTTCAAGCCATGGAATCATTGTTTAG 3282 0.4302 MTEKKTYSFCGFLLLSLFVLLSVEVIVGEDSLETDKQVLLELKAYLDSKTLEDHGNYVYWNRSTSPCEWPGIWCTHINGTTNRVVGIDLSGSEITGEIFNNFSMLTELTHLDLSQNTLFGDIPEDLRHCQKLIHLNISHNILAGELNLTGFRTLKTLDLSVNRLHGEIGVNLFAGACNALVTLNVSGNNLTGGIGGWLDQCPMLQNLDLSTNNLSGGLGNGFARLKEFSVAENHLSGNVLSEAFPLDCSLVELDLSLNGFVGEAPKGVANCKNLTILNLSSNNFSGGIPIEIGSISGLKGLYLGNNSFSRDIPQNLLNLANLVLLDLSRNNFGGEVQEIFGEFKQLSFLVLHSNHYTGGLISSGILKLPKVSQLDLSFNNFSGPLPVEITQMASLQFLMLSYNQFSGPIPAEFGNMAHLQALDLAYNNLNGSIPPSLGKMSSLLWLMLADNSLSGEIPPELGNCTSLLWLNLANNKLSGNLPPELSKIGRNAMTTFELNRKSEQILSGSSECLAMRRWMPADYPPFSFVYSILTRKNCRGLWYKLLTGNGIFPFCPPGASLSKPQISGYVQLSGNNLYGEIPSVIGTMVNFSMLHLGFNNFSGKFPAAMGTMSLVVLNITMNKFSGEIPSEVGNMRCLQNLDFSSNNFSGQFPTSLNSLTELNKFNISFNPLITGVVPSTGQFVTFDMNSYLGDPLLVLPNFIYNITGDKNTTLHKYHKKESKLSVFLGFAAITLAFMVFGLLTIIVCALRKSPLEDPGYLLREAKQSHDSSSSASSPWLSDTVKVIRLNKTAFTHDDILKATGNFSEDRIIGKGGFGTVYKGVFQDGRIVAVKKLQREGIEGEKEFRAEMEVLSGHGFGWPHPNLVTLYGWCLNGSEKILVYEYIEGGTLEDLITDRTSFTWRRRLEVAIDVAKALVYLHHECYPPIVHRDVKASNVLLEKDGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRAVDGGEESLVEWAWRVVGRGRLGRALPVSVMGSGLVGGAEEMSEVLRIGVKCTAEAPYVRPNMKEVLDMLIGIYYSKGYPSSHGIIV* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4132 1093 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Amo01g4132 1093 SUPERFAMILY Protein kinase-like (PK-like) 788 1077 IPR011009 -
Amo01g4132 1093 Gene3D Phosphorylase Kinase; domain 1 767 885 - -
Amo01g4132 1093 SUPERFAMILY L domain-like 256 674 - -
Amo01g4132 1093 CDD STKc_IRAK 812 1079 - -
Amo01g4132 1093 ProSiteProfiles Protein kinase domain profile. 806 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g4132 1093 SMART LRR_typ_2 416 439 IPR003591 -
Amo01g4132 1093 SMART LRR_typ_2 151 175 IPR003591 -
Amo01g4132 1093 SMART LRR_typ_2 295 319 IPR003591 -
Amo01g4132 1093 SMART LRR_typ_2 440 464 IPR003591 -
Amo01g4132 1093 SMART LRR_typ_2 105 129 IPR003591 -
Amo01g4132 1093 SMART LRR_typ_2 392 415 IPR003591 -
Amo01g4132 1093 Gene3D Transferase(Phosphotransferase) domain 1 886 1085 - -
Amo01g4132 1093 ProSitePatterns Protein kinases ATP-binding region signature. 812 835 IPR017441 GO:0005524
Amo01g4132 1093 Gene3D Ribonuclease Inhibitor 324 515 IPR032675 -
Amo01g4132 1093 SMART serkin_6 806 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g4132 1093 Gene3D Ribonuclease Inhibitor 536 713 IPR032675 -
Amo01g4132 1093 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1082 - -
Amo01g4132 1093 Pfam Protein kinase domain 807 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g4132 1093 Pfam Leucine Rich Repeat 108 129 IPR001611 GO:0005515
Amo01g4132 1093 Pfam Leucine rich repeat 152 214 IPR001611 GO:0005515
Amo01g4132 1093 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1082 - -
Amo01g4132 1093 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Amo01g4132 1093 Gene3D Ribonuclease Inhibitor 32 317 IPR032675 -
Amo01g4132 1093 Pfam Leucine Rich repeat 271 286 IPR001611 GO:0005515
Amo01g4132 1093 SUPERFAMILY L domain-like 62 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4132 Amo-Chr1 116276200 116279931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g4132 55 1076 Receptor kinase-like Gene Family AT1G55610 32.304 2.93e-150 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Amo01g4132 Pkinase 7.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4132 - - gmx:100783886 1583.93