Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo01g4119 | AAGTTTAGCTCCTCATGGGCTGCGTGGTGGTCAAGCAAGGGGTGTCCTCGGAAGAGCGAGTTGAGTGACTCCTCCAGCTTCAGGCTGGTCGGCAATTTGCAAAAGTACGTCGAAGGTGAGCAGGCGGCCGCCGGTTGGCCCGCTTGGCTTAGCTCCGTCGCCGCTGAGGCCATTCAGGGTTGGGTTCCCCTCCGTGCTGATGCATTTGAGAAGCTTGAGAAGATTGGGCAGGGTACATATAGTAGTGTTTTCAGAGCAAAGGAGCTTGAGACTGGGAAGATAGTGGCTCTGAAGAAGGTCAGGTTTGACAATTTCGAGCCAGAGAGCGTCCGGTTTATGGCGCGGGAGATAATGATTCTAAGAAGGCTTGATCATCCCAACATCATCAAATTGGAGGGCTTGATTACTTCCAGGTTGTCTTGTAGCATCTACCTTGTGTTTGAGTACATGCAACATGACATCACAGGGCTATTGTCTAGACCAGAAATCAAGTTTAYTGAATCACAGATTAAATGCTACATGAAACAGTTGTTATCTGGTCTTGAGCATTGTCACTCGAAGGGTGTGATGCACCGAGACATCAAGGGATCGAATCTTTTGGTGAATGATGAAGGCATATTGAAGGTGGCAGATTTTGGATTGGCAAACTGGTGCAATTCAGGAAACAACAAGCAGCCCCTCACAAGTCGTGTTGTCACCTTGTGGTACCGTCCGCCGGAACTCTTGCTCGGCTCGACAGATTATAGCCCATCTGTGGATCTCTGGAGTGTTGGCTGTGTATTTGCAGAGCTACTTATTGGAAAGCCTATACTTCAGGGAAGAACTGAGGTTGAACAATTGCATAAAATCTTCAAGCTCTGCGGCTCTCCACCTGATGACTACTGGAAAAAGACCAAACTTCCTCATGCAACTTTGTTCAAGCCACAACAACCATACGATAGTAGCCTCTGGGAGACYTTTAAAGATTTGCCTGCGACCAGCATAAATGTGCTACAAACGCTTCTTTCTGTCGAACCGAGCAAACGTGGGACTGCCACATCTGCTCTCTCATCAGAGTACTTCAAAACAAAACCATATGCATGTGATCCATCAAGCATGCCAATATACCCACCTAGCAAGGAGATTGACGCAAAGCACCAGGAGGAGTCAAAAAGGAAAAAGATTAGCGGCCGAGCTTGTAGASCAGAATCACGAAAACCATCAAGAAAGCCACTAGCACTCAGTAAATTAGCCCCAGCTGAGGATTTGACAAGTCAAATTCAAACTTCCCAAAGACAAAAAGTTGATGATAGCTCTTGCCAAGTCCTTAAAGAAGAGAACATTGACATAGATGAGGAGGCACCAAAGCTATCTAGTGATAAACCACWAGAACAAGATGGTTCCCATATGAAGGATGAAACAAAAGTAGATATTCCCTTTCCAGGACCATTGCAAGTTTCAAAATCAAGTGGCTTTGCATGGGCGAAAAGGCGTAAAGATGACACCTCAATTAGAGCACATTCTCGATCAATTTCAAGAGGGCACTTGTATAATTCCTTAGAAACTTCGACAGTAACTTCAAGGAATAATTCTGAATCCAGAAACTATGAAAACAAGGAATTCTGTGGAGGWCGCTCCAACTCTAGGGGCCGTGATCTACTTGAAATTTCTAAGCTTGTAATGCAGAACCAGTGGAATAAGTTTGATCGTCCCGACTCATTTGATACTTCTGATGAGTACCATTCACAAGAACTATCTATGACACTTTATCACAGAGAAGACTCATTATCCAAGAGAAGTAACCTGAGTTCACAGGACCAAGGAGACACAGTTGATTTTTCAGGACCCTTAATATCTCAAATGCACACCGTCGATGAGATCTTAGAAAGACATGAGCGACACATACGGCGTACTGTCCGGCGATCSTGGTTTCAGAAAGATAAGAAGAATGGGAAGTAA | 1938 | 0.4489 | KFSSSWAAWWSSKGCPRKSELSDSSSFRLVGNLQKYVEGEQAAAGWPAWLSSVAAEAIQGWVPLRADAFEKLEKIGQGTYSSVFRAKELETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMQHDITGLLSRPEIKFXESQIKCYMKQLLSGLEHCHSKGVMHRDIKGSNLLVNDEGILKVADFGLANWCNSGNNKQPLTSRVVTLWYRPPELLLGSTDYSPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKTKLPHATLFKPQQPYDSSLWETFKDLPATSINVLQTLLSVEPSKRGTATSALSSEYFKTKPYACDPSSMPIYPPSKEIDAKHQEESKRKKISGRACRXESRKPSRKPLALSKLAPAEDLTSQIQTSQRQKVDDSSCQVLKEENIDIDEEAPKLSSDKPXEQDGSHMKDETKVDIPFPGPLQVSKSSGFAWAKRRKDDTSIRAHSRSISRGHLYNSLETSTVTSRNNSESRNYENKEFCGGRSNSRGRDLLEISKLVMQNQWNKFDRPDSFDTSDEYHSQELSMTLYHREDSLSKRSNLSSQDQGDTVDFSGPLISQMHTVDEILERHERHIRRTVRRSWFQKDKKNGK* | 646 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo01g4119 | 645 | MobiDBLite | consensus disorder prediction | 414 | 430 | - | - | |
Amo01g4119 | 645 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 361 | IPR011009 | - | |
Amo01g4119 | 645 | MobiDBLite | consensus disorder prediction | 515 | 537 | - | - | |
Amo01g4119 | 645 | MobiDBLite | consensus disorder prediction | 589 | 609 | - | - | |
Amo01g4119 | 645 | ProSiteProfiles | Protein kinase domain profile. | 69 | 354 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo01g4119 | 645 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524 | |
Amo01g4119 | 645 | MobiDBLite | consensus disorder prediction | 593 | 609 | - | - | |
Amo01g4119 | 645 | MobiDBLite | consensus disorder prediction | 365 | 475 | - | - | |
Amo01g4119 | 645 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 151 | - | - | |
Amo01g4119 | 645 | Gene3D | Transferase(Phosphotransferase) domain 1 | 152 | 393 | - | - | |
Amo01g4119 | 645 | MobiDBLite | consensus disorder prediction | 431 | 469 | - | - | |
Amo01g4119 | 645 | CDD | STKc_CDK9_like | 69 | 354 | - | - | |
Amo01g4119 | 645 | Pfam | Protein kinase domain | 69 | 354 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo01g4119 | 645 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 27 | 638 | - | - | |
Amo01g4119 | 645 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672|GO:0006468 | |
Amo01g4119 | 645 | SMART | serkin_6 | 69 | 354 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo01g4119 | 645 | MobiDBLite | consensus disorder prediction | 374 | 403 | - | - | |
Amo01g4119 | 645 | PANTHER | CELL DIVISION PROTEIN KINASE | 27 | 638 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo01g4119 | Amo-Chr1 | 116062992 | 116067242 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo01g4119 | 61 | 414 | Core Cell Cycle Gene Families | AT5G10270 | 48.378 | 1.66e-110 | 340 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Amo01g4119 | Pkinase | 7.1e-69 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo01g4119 | - | - | aip:107633955 | 1228 |