Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4116 ATGTTTCAGTATTTTTTAGAGCTGATGAAGGTGCCACGAGTAGAGTCAAAGTTAAGAGTATTCTCTTTCAAGATTCAATTTCTGTCTCAGGTTACAGAATTTAAGAAGAGTTTAAATGCTGTGAACTCTGCTTGTGAAGAGGTCCGAAAGTCTGTCAAGCTGAAGGAGATCATGAAGAAAATTCTTTTTTTGGGTAATACATTAAATCAAGGAACAGCTAGGGGATCCGCAATTGGATTCAAGTTGGATAGTCTTTTAAAGCTTACTGACACTCGTGCTTCTAACAATAAGATGACACTGATGCACTATCTTTGCAAGGTTCTAGCTGATAGGTCGCCTGGACTGCTTGACTTCCACTTAGACCTTTTAAGCCTGGAAGCTGCGACTAAGATACAATTGAAGTCCTTAGCAGAAGAGATGCAGGCAATCATCAAGGGACTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGCAAATGATGGACCTGTGTCCGAAGTTTTCTGTAAGACATTGAAAGAATTCATATCTGTTGCTGAGTCAGAGGTAGCATCTCTGACAAGCCTATATTCTGTGGTGGGTAGAAATGCTGATGCACTCGCACTATATTTTGGCGAGGATCCTGCTCGTTGTCCATTTGAACAAGTCACCACAACTCTCTTAAATTTTATAAGGTTGTTTCGGAAAGCGCACGAAGAGAATTGCAAGCAGGCAGAGTTAGAGAAGAAAAGAGCCGAGAAAGAGGCRGAAATGGAGAAGGCTAAGGGCGTTAACTTGACAAGGAAGAGTGCAAAAGATAGTTGA 801 0.412 MFQYFLELMKVPRVESKLRVFSFKIQFLSQVTEFKKSLNAVNSACEEVRKSVKLKEIMKKILFLGNTLNQGTARGSAIGFKLDSLLKLTDTRASNNKMTLMHYLCKVLADRSPGLLDFHLDLLSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASANDGPVSEVFCKTLKEFISVAESEVASLTSLYSVVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENCKQAELEKKRAEKEAEMEKAKGVNLTRKSAKDS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4116 266 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 252 IPR015425 -
Amo01g4116 266 SUPERFAMILY Formin homology 2 domain (FH2 domain) 3 254 - -
Amo01g4116 266 Gene3D Formin, FH2 domain 2 260 IPR042201 -
Amo01g4116 266 PANTHER FORMIN-J 3 257 - -
Amo01g4116 266 Coils Coil 133 157 - -
Amo01g4116 266 Coils Coil 227 261 - -
Amo01g4116 266 MobiDBLite consensus disorder prediction 244 266 - -
Amo01g4116 266 Pfam Formin Homology 2 Domain 3 226 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4116 Amo-Chr1 116019596 116023485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g4116 3 266 FH2 protein (formin) Gene Family AT5G07740 81.818 6.39e-144 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4116 - - ahf:112709992 479.174