Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4092 ATGGCTGCAAAGTTGCTGCATTCTTTAGCAGATGAAAACCCAGATTTGCAGAAGCAAATTGGATGCATGACTGGGATTTTCCAACTGTTTGATCGTCACCAGATAGTTACTCCTCGCCGCATTAGCCACAAGAGGCTTCCTCCTGGTAATTCTCACTCCAATTATGAGAGCATGAGAAGAGATTCTAATAGCATACACCAACGGCAAACAGCTGCTGATATGAACTTAAACAAGGGTGTAAGTGAAAAACAAAGAATTTCAACAGAATCATCAAGGGCYTCATTCTCTTCATCRTGTTCATCGTCAATATCCTCTATGGACTGTAAAGCTCAAGCAGATGCTTCCTTCGACCGRATTACTTTTCCTGAAACTCCTAGAAGGGACCAAGTTATGAACCAAACAAGTACCTCTACAAATTTGGGTCACCAGTCCCTTGACCTGAGGGATGTGGTAAAAGACTCTATGTACAGAGAGGCCAGAGGACTATCAGTGAAGACTACAATCAAAGAAGAAGTTTCCATTCGTGCATCGAAGCAGAAAGATTCACCGAGACCTCTTCATCTGTCCATTTCTGATTATGAATATGATAGAGTTGGAATTGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCTATCCGAGTCCTTTCTAAGCTTACAGAAGCCCCTTGGCACTATGATGAAGGTAGAGAGGTTCGGAGGTTGCCTTATGAAGTAAAAGATGSACAAWGGCATTCGATCTCAAAGGATGCTCGTCGGTTTTCTTATGATGCAAGGGAAGTACATCGATACTCTTCTGAATCACAAGATACCATCAAATCCACACCAAGACTAAAAGAGCTTCCTAGACTTTCCCTTGACAGCAGGGAAGTTTCTTGGCGTACTTATACCTCTGATTCAAAATCCAATCATCTCTTAAGAAATTTCAGTAGTGGTACTTCCGACTCAGATGACAAAGTCTCAAGTCTGCAACAACGGCCTTCAGCAGCATCACAGAGCMGGCCACCGAGTGTTGTAGCAAAATTAATGGGGTTGGAAGCATTGCCAGCGTCCAATTTAGCCAGTGAGACTCRCTCAATTTTGAGTGAAACTGACCCAACTCAAGGTGATGATCAGTTTTCAAGATCATCAAAAAATGGACTCATTAGGCCATTCAAAGTTTCTAATTCTTCGAAAAGCTCAATGAAAGACCCGAGTTCCCCAAGCAGGAAGAACCCGGATTTGGTTGTGAAACCTATCTCAAGTTCAAGGCATCCCATTGAACCTGCACCATGGAAGCGGCGAGATAGAAATCAAAGTTCACCAAGACCRAGTTCCGSGGCCATGAAGGCTACAAGTATAACAGATTCATTCCCTTCAGTTTACAGTGAAGTTGAGAAGAGATTGAAGAATCTTGAATTTGATCAGTCTGGAAGGGATCTTAGAGCGCTCAAACAGATACTAGAAGCAATGCAAGCAAAGGGGCTGCTAGAGACAAGACAAGAAGAACAAGYTTCAAATCTTGTAGGAAATCAAAGAGACCATGAACCAAAACCTGYGAGTCTAACTCAGAATTCTAGGACAGCAAGGAAACAAAGTCCTCACAGAAACAACATTGCATCTTCAACTTTCGGKGGATCTGACTCAGCAAGGAGCTTTGAATCTCCAATTGTAATAATGAAACCGGCAAAGCACATTGAGAAAAATGGAATTTCATCATCTTCAGTTATTCCACTTGTTGAGCTTTCTGATTCACATAAACTCCAGAGTGTGAGGATGAAGGTACGTACAGGTAATGGAAAGGGTACAGGTTCTGGTCGAATAACAAAAGATCAGTCTCCTAGAAACAATCACAGGGAAGCTTCTACTAGCTTCAGTGAAAAGAAAGCTAGTAGCAAGACTATAAGATCAACACAATCACAACCAAGATCTCAGCAGTTTACAAAAGAAAATAGCCCAAGYTCTGTAAAGAACTCAGGATCTGTTAGCCCAAGATTGCAACAAAAGAAGTTAGAACTTGAGAAGTGTTCTCGCCCACCAACACCTCCATCAGAGTCAAGTAAACCRAGACGACAATCTGGTAAGCAGACCACAGAATCAGGTTCTCCGGGTAGAAAACCGAGGCATAAAGTCCCTATTTCACAACAAAGTGATGACCAACTTAGTGAAATAAGCAATGAATCAAGAAGTTTGAGTTTCCAAGGGGATGAGACATCACTACAATCAGGAAGTACCATAAYTGAGTCAAAGATGGATGTGGAATTAGCCAGCAATTTACAATCTGCTGAAACTGTCGRAAGCCAARGCCCATCTCTTAAGRCTATTGAGCAGGTGGTTTCAGGAACAATACAGAAGAAATCAACTCTGATGTTGGATGAGAATGAGCCTATTTCAGAACTTGCAATGGATGCTCCAGATCATCCGAGCCCTGTATCGGTTCTGGACGGCTCAGTATACAGAGAGGATGTGCTATCCCCAGTCAAGCTTATATCCAATGCTCCGAAAGGTGATGTTCAATCTAAAGAAGACGATTATGAATATCAGTGGAACACTGCAGATGATAGCCTTTCAGTTAACAGCGAGATCAACCGCAAGAAATTGCAAAGCATAGATCACCTGGTTCAGAAGCTTAGACGGCTAAACTCGAGTCACGACGAGGCTAGAATCGATTACATTGGTTCCCTTTGCGAAAACTCGAACCCAGACCACAGATACATATCAGAAATACTATTGGCTTCAGGTCTCCTACTCAGAGATCTGAGTTCAGAATTGCTGACATTTCAACGCCACTCGTCGGGTCATCCCATTAACCCCGAGTTATTCCTTGTATTGGAGCAGACCAAGGCAAGTAGCTTTCTTGCTAAAGAAGAAATCGGCATTGAAAAAGTTGATTACAAGAAGACAAACACAGACAAGTCTCACAGGAGATTCATCTTTAATGCTGTGAATGAGATTCTTGGCATGAAACTAGCTTCTTCTCCTGAACCATGGTTGAAGCCTAATGGACTCGCAAAGAAGAACCTCAGTGCACAGAAACTTCTAAAAGAACTGTGCTTTGAGATAGAAAAAATTCAAGTGAAGAAGCCCGAATGCACAGAAGATGAAGGTGATGGTATAAAAAGTATACTATGTGAAAATGTTATGAATGGAACAGAAAGTTGGACAATTTTCCATGGTGAAACATCTGGGGTTGTGTTGGATGTTGAGAGACTGATATTTAAAGACTTAATTGATGAGATTGTGATTGGTGAAGCAACGGGCTTGAGAATCAAGCCAGTTAGACGCAGGAAGCTATTTGGAAAGTAA 3288 0.4167 MAAKLLHSLADENPDLQKQIGCMTGIFQLFDRHQIVTPRRISHKRLPPGNSHSNYESMRRDSNSIHQRQTAADMNLNKGVSEKQRISTESSRASFSSSCSSSISSMDCKAQADASFDRITFPETPRRDQVMNQTSTSTNLGHQSLDLRDVVKDSMYREARGLSVKTTIKEEVSIRASKQKDSPRPLHLSISDYEYDRVGIDGKQSVPIDLKESIRVLSKLTEAPWHYDEGREVRRLPYEVKDXQXHSISKDARRFSYDAREVHRYSSESQDTIKSTPRLKELPRLSLDSREVSWRTYTSDSKSNHLLRNFSSGTSDSDDKVSSLQQRPSAASQSRPPSVVAKLMGLEALPASNLASETXSILSETDPTQGDDQFSRSSKNGLIRPFKVSNSSKSSMKDPSSPSRKNPDLVVKPISSSRHPIEPAPWKRRDRNQSSPRPSSXAMKATSITDSFPSVYSEVEKRLKNLEFDQSGRDLRALKQILEAMQAKGLLETRQEEQXSNLVGNQRDHEPKPXSLTQNSRTARKQSPHRNNIASSTFGGSDSARSFESPIVIMKPAKHIEKNGISSSSVIPLVELSDSHKLQSVRMKVRTGNGKGTGSGRITKDQSPRNNHREASTSFSEKKASSKTIRSTQSQPRSQQFTKENSPSSVKNSGSVSPRLQQKKLELEKCSRPPTPPSESSKPRRQSGKQTTESGSPGRKPRHKVPISQQSDDQLSEISNESRSLSFQGDETSLQSGSTIXESKMDVELASNLQSAETVXSQXPSLKXIEQVVSGTIQKKSTLMLDENEPISELAMDAPDHPSPVSVLDGSVYREDVLSPVKLISNAPKGDVQSKEDDYEYQWNTADDSLSVNSEINRKKLQSIDHLVQKLRRLNSSHDEARIDYIGSLCENSNPDHRYISEILLASGLLLRDLSSELLTFQRHSSGHPINPELFLVLEQTKASSFLAKEEIGIEKVDYKKTNTDKSHRRFIFNAVNEILGMKLASSPEPWLKPNGLAKKNLSAQKLLKELCFEIEKIQVKKPECTEDEGDGIKSILCENVMNGTESWTIFHGETSGVVLDVERLIFKDLIDEIVIGEATGLRIKPVRRRKLFGK* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4092 1095 MobiDBLite consensus disorder prediction 39 89 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 305 343 - -
Amo01g4092 1095 PANTHER LONGIFOLIA PROTEIN 1 1093 IPR033334 GO:0051513
Amo01g4092 1095 MobiDBLite consensus disorder prediction 492 541 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 305 336 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 681 695 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 584 738 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 357 446 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 621 660 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 357 402 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 493 541 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 708 738 - -
Amo01g4092 1095 Pfam Domain of unknown function (DUF4378) 896 1073 IPR025486 -
Amo01g4092 1095 Pfam DUF761-associated sequence motif 332 353 IPR032795 -
Amo01g4092 1095 PANTHER LONGIFOLIA PROTEIN 1 1093 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 606 620 - -
Amo01g4092 1095 MobiDBLite consensus disorder prediction 47 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4092 Amo-Chr1 115672190 115677379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g4092 140 1094 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.240 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4092 - - gmx:100787391 1320.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g4092 01 115672190 115677379 Amo10g2574 10 88648762 88653180 PCT
Amo10g2574 10 88648762 88653180 Amo01g4092 01 115672190 115677379 PCT