Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4046 ATGATAGAGGGGACCAAGGAGGTTTCATCTAATTTTCAGGAGAATGTCATTCCAGAGGTGGAAGAGGACCCGATAACAAATGAGACCTTTGTTGCAGAGACAAAATTTGTTCCGATTGGTGCTAGTCAAGCAGACGATCAAAGATATGTCATCGTTCTCGATGGAATAGGTTCATTTGGTGTAATTGATTTTGATGCATTGCGAGATGGGGAGATTATGATGATAGAGTTTTTGGATTTGAAAGCTGCTTATGACTTCTATAACGAATATGGACAAATTAAAGGTTTTTTTCATAAGGCGAATCTAAGGGAGACATTATATAAAAAAAATTTTGTGTGCTTGCGACAAGGTGAACGAGATGCAAAGCATGTTCATAGAACTAATAGGAAGATAGATCCTAGACCAGTAATCCGATGCGGGTGTAATGCGCGGATAAAAGTCCATGTTGACTTGCGGAACGGGCGATGGTACGTGGAGTTCTTCTCCGATGAACATAATCATGATATGTTGGAGGCATGGTTTAGAGGAATGATGCGGTCTCACTGGGCAATAAAAACAGGGGATTTACACTAG 573 0.4049 MIEGTKEVSSNFQENVIPEVEEDPITNETFVAETKFVPIGASQADDQRYVIVLDGIGSFGVIDFDALRDGEIMMIEFLDLKAAYDFYNEYGQIKGFFHKANLRETLYKKNFVCLRQGERDAKHVHRTNRKIDPRPVIRCGCNARIKVHVDLRNGRWYVEFFSDEHNHDMLEAWFRGMMRSHWAIKTGDLH* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4046 190 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 70 175 - -
Amo01g4046 190 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 70 175 - -
Amo01g4046 190 Pfam FAR1 DNA-binding domain 85 170 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4046 Amo-Chr1 114759565 114760269 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g4046 FAR1 4.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4046 - - adu:107486256 301.212