Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4021 ATGTCATCGCCGGGCTTCACCGGCGGYGGGGCATCAGATTTCTTCACCGGAGCAGYCCGATCCAGCACCATGAACACGAACCCCRGCGCCTCCGCCGTGGCAGCCAACAACCACCGGCACCTCCACCCTTCCCACCCCCTGTACCGAACCCAACAGCAGCTGCCCGCACTGTTTCTAGATCCTTCCTCACAGATCACGCCTCGSCACCAAACACCAACAACACAACCACCACCAACAACCCTCATCGGTAAACGCACCCTCGCCGAATTTCAAACCCAACAACAACATAACCACCTCCTTAACAACCACAACCACAACAGCAATAACAACCATGTCCTCTCTAACCTCCTACTCCGCTCCGTTAAGCCAAGGACGGCGTCGTTTCACACAGGTTCCCCTTTGTCCCCTTTATCGCCCATAGACTTCTCAATCCCTGAATTGCAAATCCCTTCCTCAACTCATCATGCCTTCCAAACGCAGCGTTTTGGCATGCCTCTCTTCAACCAGCTTCGCCCTAACCCCATTCACTCCAACAGCCTCCCCTTGCCTCCTCCCAACTCCAATAATCATTTCCCCTACCGATGCTCCAATTTGAGTGGTTCCGTTTCCAACCGGGTCCAGCTCCCGCTCCCGGCCGAACCGGACAACAAGATTAATACGATGGACCACAGGCTTCTGGAATTGGAGAAGCAGCTTCTAGAAGACGAAGAAGAAGAAGCTGAAGCCGATGCGGCTTCTGTGATCACAACTAGCGCGTGGTCAGAGACCATTCAGAATCTCATGGGAAACGGGTCCACACCCAAACCAGCTTCTTCGTCCCCTACATCCTCAACAACRTCTTCAACTTCGTCTTCTTCCTCCGTGGCTTCYCCTGCCATAGGGTGCTGGAAGCAGACGCTAATGGAGGCCGCATCTGCCATAGCCGAAGGTAAACAAGATTCTGCCACTGAGATCCTGGCCAGGTTGAGTCAAGTTTCCAACCCGAATGGAAATTCGGATCAAAGGTTGATGGATTGCATGGTTTCGGCGCTCAAATCGAGGGTAAACCCGCTGGAGAATCCTCCTCCCGTGGCCGAGTTGTTCAGCAACGAACACGCCGAGTCGACTCAGTTGATGTTTGAAAACTCGCTCTGTTTCATGGTAGGGTTCATGGCAGCCAACTTCGCAATCCTCGAAGCTGCATTTGAGAACAAAACGGAGCTGAAGAGGTTCTGCGTGGTTGATTTCGATATAGGCCACGGGAAACAGTACGTGAGCCTTCTACTCGCGCTCTCCGCGCGTGGRAGAACCCCRCCGGCYATGGTAAGGATCGTGGCGGTGGCGGACACCGGCGGCCAAGAAGAGAGATTAAAATCTGTGGGCGAAATGCTAGCAAGACAGGCAGAGAGGTTTAGGATCGGATTCGAGTTCAAAATCGTTCAGGTCACTCAGCGATTCTCCGAGTTGACCCGCGAGTCGCTTGGATGCGACGCGGATGAGTTTCTAGCTGTGAACTTCGCTTTCAAATTGAACCGAATCCCGGACGAGAGCGTGTCCACGGAGAATCCACGCGACGAGCTCTTGAGGCGCGTGAAGTCACTCTCGCCGCGCGTGGTTACAATCATCGAACAGGAAATAAACGCSAACACGGCGCCGTTTCTGGCGCGCGTGGCCGATTCGTGTTCGTATTACGGCGCGCTCTTCGACTCAGTTGAGTCCTCACTCGGCAAGGACAACAATRGTAACTCCGAGCGAGTCAAGGTGGAGGAAGGACTGAGTCGAAGGGTTTGCAACTCGTTGGCGTGTGAAGGCAGAGACCGCGTGGAGCGTTACGAAGTTTTCGGAAAATGGCGGGCACGCATGGGAATGGCGGGGTTCAAGTCSAAGCCACTGAGTCAGAACGTGGCCGAGTCGATCAAGTCACGACTCGCCCAGAGCAACAATTGTAACASCCGAGTCAACTCGGGMCTCACCGTTAAAGAAGAGAACGGTGGGATTTGCTTTGGATGGATGGGGAAAACTCTCACCGTCGCTTCTGCTTGGCTCTAA 2028 0.5385 MSSPGFTGGGASDFFTGAXRSSTMNTNPXASAVAANNHRHLHPSHPLYRTQQQLPALFLDPSSQITPRHQTPTTQPPPTTLIGKRTLAEFQTQQQHNHLLNNHNHNSNNNHVLSNLLLRSVKPRTASFHTGSPLSPLSPIDFSIPELQIPSSTHHAFQTQRFGMPLFNQLRPNPIHSNSLPLPPPNSNNHFPYRCSNLSGSVSNRVQLPLPAEPDNKINTMDHRLLELEKQLLEDEEEEAEADAASVITTSAWSETIQNLMGNGSTPKPASSSPTSSTTSSTSSSSSVASPAIGCWKQTLMEAASAIAEGKQDSATEILARLSQVSNPNGNSDQRLMDCMVSALKSRVNPLENPPPVAELFSNEHAESTQLMFENSLCFMVGFMAANFAILEAAFENKTELKRFCVVDFDIGHGKQYVSLLLALSARGRTPPAMVRIVAVADTGGQEERLKSVGEMLARQAERFRIGFEFKIVQVTQRFSELTRESLGCDADEFLAVNFAFKLNRIPDESVSTENPRDELLRRVKSLSPRVVTIIEQEINANTAPFLARVADSCSYYGALFDSVESSLGKDNNXNSERVKVEEGLSRRVCNSLACEGRDRVERYEVFGKWRARMGMAGFKSKPLSQNVAESIKSRLAQSNNCNXRVNSGLTVKEENGGICFGWMGKTLTVASAWL* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4021 675 MobiDBLite consensus disorder prediction 168 196 - -
Amo01g4021 675 PANTHER SCARECROW-LIKE PROTEIN 8 76 674 IPR030013 -
Amo01g4021 675 MobiDBLite consensus disorder prediction 16 33 - -
Amo01g4021 675 MobiDBLite consensus disorder prediction 247 285 - -
Amo01g4021 675 ProSiteProfiles GRAS family profile. 287 675 IPR005202 -
Amo01g4021 675 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 76 674 IPR005202 -
Amo01g4021 675 MobiDBLite consensus disorder prediction 229 285 - -
Amo01g4021 675 MobiDBLite consensus disorder prediction 1 81 - -
Amo01g4021 675 Pfam GRAS domain family 297 674 IPR005202 -
Amo01g4021 675 Coils Coil 218 245 - -
Amo01g4021 675 MobiDBLite consensus disorder prediction 46 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4021 Amo-Chr1 114296067 114299089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g4021 44 674 GRAS Transcription Factor Family AT5G52510 45.802 8.64e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo01g4021 GRAS 3.2e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4021 - - aip:107644872 1185.63