Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3996 ATGGCTACTACACCAATGAATTCAAACCTCCTCTACAAGATTATTATTGTTATTTCCTTCCTTGCAATCACAACTTGCCCGGTTGCCTCAGCCGAGGAATGTGCCTCGAACCACCAAGGAGCATGTCACAACCGGAGCGAGGCGCTCAAGTATAAGATAATAGCAATACTTGCAATTCTAGTGATGAGCATGATCGGCGTATCGCTGCCGATGCTCTCACGCGTTGTGCCCGCGATTCACCCAGACCGTGACCTTTTTGTGCTAGTGAAGGCCTTTTCCTCCGGTGTCATCCTCGCCACCGGTTACATGCACGTATTGCCGGACTCATTCAGTGACCTCATGTCGGACTGCTTGCCGGAAAAACCGTGGCACAAGTTCCCATTCACTACATTCATCGCCATGTTTTCTGCTGTTTTCACCCTCATGGTGGACTCTTTCTCCAACTGTTTCTTTAAGAAGAGAATCCTTGCTTCTTCTTCTACTACTACTGGTGATTTTTCCGAGAAGAACATTGAAGTTGATGGTGGTTGCCGCAATGAAGTGAATAAAGAATTGGAATTGCTTAGTCACAGTCACACTCACGGTGATGAGATTGAACACGGAAATGGAAACACGAAAGTTGTGAGTGGGGAACAGTTGCTTCGCTATCGTGTTATTGCTCAGGTGTTGGAGCTAGGGATTGTGGTGCACTCGGTGGTGATTGGTTTGTCAATGGGAGCTTCGGATAATCCATGCACAATTAGGCCTCTCATTGCAGCACTTTGCTTTCATCAATTCTTTGAGGGAATGGGCTTAGGAGGCTGCATACTTCAGGCAGAATATGGGATGATGATAAAGGGCACTATGGCCTTCTTCTTTTCGGTGACAACTCCATTTGGAATTGCATTGGGGATAGCTTTGTCGAAGGTGTATAGTGAAACAAGTCCAACCTCACTCATAGTTGAAGGTGTTTTGAATGCTGTGTCTGCAGGGCTTCTCAATTACATGGCATTGGTAGAGTTATTGGCCACTGATTTTATGGGCTCAAAACTTCAAAGTAAAGTGAAACTTCAAATGTGTGCATATCTTTTTGTTATGCTGGGAGCAGGAGGAATGTCAGTCATGGCAATATGGGCATAG 1119 0.4567 MATTPMNSNLLYKIIIVISFLAITTCPVASAEECASNHQGACHNRSEALKYKIIAILAILVMSMIGVSLPMLSRVVPAIHPDRDLFVLVKAFSSGVILATGYMHVLPDSFSDLMSDCLPEKPWHKFPFTTFIAMFSAVFTLMVDSFSNCFFKKRILASSSTTTGDFSEKNIEVDGGCRNEVNKELELLSHSHTHGDEIEHGNGNTKVVSGEQLLRYRVIAQVLELGIVVHSVVIGLSMGASDNPCTIRPLIAALCFHQFFEGMGLGGCILQAEYGMMIKGTMAFFFSVTTPFGIALGIALSKVYSETSPTSLIVEGVLNAVSAGLLNYMALVELLATDFMGSKLQSKVKLQMCAYLFVMLGAGGMSVMAIWA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3996 372 TIGRFAM zip: ZIP zinc/iron transport family 34 372 IPR004698 GO:0005385|GO:0016021|GO:0071577
Amo01g3996 372 Pfam ZIP Zinc transporter 50 369 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo01g3996 372 PANTHER ZINC TRANSPORTER 7 22 372 - -
Amo01g3996 372 PANTHER ZINC/IRON TRANSPORTER 22 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3996 Amo-Chr1 113876108 113878773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3996 21 372 Inorganic Solute Cotransporters AT1G31260 53.482 1.15e-130 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3996 K14709 - gmx:100784872 448.358