Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3987 ATGGATCCTAGACCAGTAACACGATGTGGGTGTAATGCGCGAATACAAGTTCATGTTGACTCGAGGAACGGGCGATGGTACGTTGAGTTCTTCTTCGATGAACATAACCATGACATGTTGGAGGCAAGGTTTAGGGGAATGATGCGGTCTCATCGGGCAATAAAAACGGGGGATTTACACCAAATTAATACCATGAGAAGCTTTGGCCTTCGAGTTCCGACAATATTTCGGCATTTCCAACAGTATTTAGAGTTCATGCGTAGGAGAGTAGTCGTTGCTGGTACAAATCTGCTTATGGAGATCCGGTTGTGA 312 0.4519 MDPRPVTRCGCNARIQVHVDSRNGRWYVEFFFDEHNHDMLEARFRGMMRSHRAIKTGDLHQINTMRSFGLRVPTIFRHFQQYLEFMRRRVVVAGTNLLMEIRL* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3987 103 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
Amo01g3987 103 ProSiteProfiles WRKY domain profile. 1 40 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3987 Amo-Chr1 113742797 113743930 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g3987 FAR1 6.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3987 - - ahf:112772626 156.762