Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3985 ATGAATATGCTCAGAGAAAGAAGACACAGTTCAGTGAGAATGGCTACACTACTAAGCTCAAATTGTTATAGTGATAATCATGGGGTCCTACTTCTCCTTCTTTTGTTACTACTACAGATRTCATCTCAACTTGCAAACTGTGGCAGCATAGTGAAGTTCCTTCCAGGGTTCCAGGGACCCCTTCCTTTTGTTCTTGAAACTGGGTATATAGGAGTGGGTGAAAATGAAGATGTGCAGGCTTTCTACTATTTCATCGAGTCAGAGAACAATCCTAAGGTGGATCCTCTCATGTTGTGGCTCACCGGTGGTCCTGGATGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATCGGACCACTTGGATTTCAAAATGAGGAATATAATGGGAGCTTGCCAAATTTGGTCTATAGGCCATACTCATGGACAAAGACAAGTAGCATTATATTTGTAGATTTACCTGTTAATACAGGCTTCACATATGCCAGATCAGAATCTGCCACAGCGCGAAGCGACTCATTGCTAGTCAACCAAACTCATCAATTTCTTAGGAAGTGGCTAACTGAGCATCCACAATTTTTCTCAAATGAATTTTTCGTCGGAGGCGATTCATACTCCGGTATTCCTATTCCAGTAATTGTTGATGAAATTTCACGAGAAAATGAAGAAGGAGTCCAACCTTGGATAAATCTTCAGGGGTACCTTCTGGGGAATGCTGCAACAACCCGAGTTGAGAAAAACTATCAAATCCCATTTGCTCATGGAATGGGACTAATTTCTGATGAACTATACCAGTCACTGCAAACAAATTGTAGAGGAGAATATATAAAAGTAGACACTAGAAGTGCATTATGTTCAAGAGATCTCAAGTCCTTTGATGAGATGACATCAGGACTCAATAAAGCCCATATTTTGGAACCTTCATGTGAATTTGGTTCACCTAAACCATTGAAGACTTCTTGGAGACGATCTATAACCGAAAACTATCCTTTGAAGTTCGTCAGCAACACTCGTCTCAGATTACCARCCTTGAACTGCCGGACTTATGGATACTTCCTTAGTAGTTATTGGGCCAATGATGACAAAGTACGGAATGCGCTAAACATACGAAAGGGAACAAAAAAGGAATGGCAACGCTGCACCTACAATATACCCAACAAGGAGGATATCCCTAGCAGCTTTCCATATCATGTAAAGCTCAGCAGAAAAGGCTATCGTTCGCTGATATACAGCGGCGATCATGACATGAATGTTCCTTTCATGGCGACTCAAGTGTGGATAAGATCGCTAAACTACTCAATAGTTGATGATTGGAGGCCATGGTATACAAATGGCCAAGTTGCAGGATATACAAGAACTTACTCCAATATGATGACATTTGCAACTGTTAAGAATGGAGGGCACACAGCTCCTGAATACAAGCCTGAAGAATGCTTGGACATGTATAGTAGGTGGATCTCTAACAGGCCATTGTAG 1470 0.4143 MNMLRERRHSSVRMATLLSSNCYSDNHGVLLLLLLLLLQXSSQLANCGSIVKFLPGFQGPLPFVLETGYIGVGENEDVQAFYYFIESENNPKVDPLMLWLTGGPGCSAFSGLVFEIGPLGFQNEEYNGSLPNLVYRPYSWTKTSSIIFVDLPVNTGFTYARSESATARSDSLLVNQTHQFLRKWLTEHPQFFSNEFFVGGDSYSGIPIPVIVDEISRENEEGVQPWINLQGYLLGNAATTRVEKNYQIPFAHGMGLISDELYQSLQTNCRGEYIKVDTRSALCSRDLKSFDEMTSGLNKAHILEPSCEFGSPKPLKTSWRRSITENYPLKFVSNTRLRLPXLNCRTYGYFLSSYWANDDKVRNALNIRKGTKKEWQRCTYNIPNKEDIPSSFPYHVKLSRKGYRSLIYSGDHDMNVPFMATQVWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNMMTFATVKNGGHTAPEYKPEECLDMYSRWISNRPL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3985 489 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 28 488 - -
Amo01g3985 489 Gene3D - 346 489 - -
Amo01g3985 489 Pfam Serine carboxypeptidase 55 486 IPR001563 GO:0004185|GO:0006508
Amo01g3985 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Amo01g3985 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Amo01g3985 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Amo01g3985 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Amo01g3985 489 Gene3D alpha/beta hydrolase 47 313 IPR029058 -
Amo01g3985 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 488 IPR001563 GO:0004185|GO:0006508
Amo01g3985 489 SUPERFAMILY alpha/beta-Hydrolases 51 488 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3985 Amo-Chr1 113725581 113729287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3985 45 74 Calmodulin-binding Proteins AT2G22960 76.667 5.62e-09 53.9