Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3967 ATGCAAATGGAGGTTCTTGGGAAGATCAAACACGATAATGTGGTTCCTCTCAGAGCTTTCTATTACTCCAAAGATGAGAAGTTGCTCGTTTACGATTACATGTCCGCCGGCAGCCTCTCTGCTCTTCTCCACGGGAGCAGAGGGTCTGGGAGAACACCATTAGACTGGGACAACAGAATGAAGATTGCACTAGGAGCAGCAAGAGGCCTAGCATGCCTCCACGTGTCAGGCAAAGTGGTCCACGGCAACATCAAATCCTCCAACATCCTCCTACGCGGACCGGACCATGAAGCTGCCGTTTCAGACTTCGGCCTCAACCCATTGTTCGGAAACGGGGGCCCCTCGAACCGCGTGGCAGGCTACCGGGCGCCTGAGGTGGTAGAAACCCGAAAGGCAACCTTCAAGTCTGATGTGTACAGCTTTGGAGTGTTTCTGTTGGAGCTATTGACAGGGAAGGCACCAAACCAAGCGTCGCTTGGGGAAGAAGGCATCGATCTCCCCCGGTGGGTGCAATCGGTGGTCCGGGAGGAGTGGACGGCGGAGGTGTTCGATGCGGAGCTGATGAGGTTCCATAACATAGAGGAAGAGATGGTTCAGCTGTTGCAGATTGCAATGGCTTGTGTGTCTGTTGTGCCGGACCAAAGGCCCAACATGCAAGACGTGGTTCGCATGATTGAGGAGATGAACCGTGGCGAGACCGATGAGGGTTTGAGACAGTCGTCTGATGATCCTTCTAAAGGATCGGAGGGTCATACTCCACCCCAGGAGAGCAGAACCCCACCCAGATCGGTCACACCGTAA 801 0.5431 MQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMSAGSLSALLHGSRGSGRTPLDWDNRMKIALGAARGLACLHVSGKVVHGNIKSSNILLRGPDHEAAVSDFGLNPLFGNGGPSNRVAGYRAPEVVETRKATFKSDVYSFGVFLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPNMQDVVRMIEEMNRGETDEGLRQSSDDPSKGSEGHTPPQESRTPPRSVTP* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3967 266 PIRSF ILK 1 239 - -
Amo01g3967 266 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3967 266 MobiDBLite consensus disorder prediction 228 245 - -
Amo01g3967 266 PANTHER OS05G0588300 PROTEIN 2 253 - -
Amo01g3967 266 PANTHER RECEPTOR-LIKE KINASE 2 253 - -
Amo01g3967 266 Pfam Protein kinase domain 3 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3967 266 SUPERFAMILY Protein kinase-like (PK-like) 3 226 IPR011009 -
Amo01g3967 266 Gene3D Transferase(Phosphotransferase) domain 1 35 247 - -
Amo01g3967 266 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Amo01g3967 266 MobiDBLite consensus disorder prediction 246 266 - -
Amo01g3967 266 MobiDBLite consensus disorder prediction 228 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3967 Amo-Chr1 113488805 113492253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3967 2 246 Receptor kinase-like Gene Family AT5G58300 64.113 8.84e-105 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo01g3967 Pkinase 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3967 - - gmx:100806857 492.656