Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3904 ATGGACCAATGGACTCTTATAAAGGAACTGATAAAATTAACACCTGAGAAAAAATGGCAGAGTGGTGGTCCAAGTTGGCTAGTACCAACAGGAAGAAGAGATGGGAGGATTTCTTCATCAAATCAAGCCTCAAACATGCCTTCTCCGCTTGACCCGGTTTCTGTCCAGAAGCAAAAATTTTCAGCCAAAGGTCTAGATGTTCATGACCTTGTCACCTTATTAGGTGCACACACCATAGGGCAGACAGACTGCAGGTTCTTCAGTTACCGTTTATACAATTTCACGACCACAGGGAACGCTGATCCTACCATAAACCAATCTTTCTTGGAGCTGCTTCAAGCTCAGTGTCCCAAAAACGGAGATGGTTTGAGAAAGGTGGCACTGGACAAAGATAGTCCTGTAAAGTTTGATGTTAGTTACTTCAAGAACGTGCGTGATGGTAGTGGCGTTCTAGAGTCAGATCAGAGGCTGTGGAAGATCCAGCTACAAAAAGTGTAG 498 0.4418 MDQWTLIKELIKLTPEKKWQSGGPSWLVPTGRRDGRISSSNQASNMPSPLDPVSVQKQKFSAKGLDVHDLVTLLGAHTIGQTDCRFFSYRLYNFTTTGNADPTINQSFLELLQAQCPKNGDGLRKVALDKDSPVKFDVSYFKNVRDGSGVLESDQRLWKIQLQKV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3904 165 MobiDBLite consensus disorder prediction 20 51 - -
Amo01g3904 165 PRINTS Haem peroxidase superfamily signature 69 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 PRINTS Haem peroxidase superfamily signature 129 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 PRINTS Haem peroxidase superfamily signature 22 34 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 MobiDBLite consensus disorder prediction 34 51 - -
Amo01g3904 165 Pfam Peroxidase 21 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 ProSiteProfiles Plant heme peroxidase family profile. 8 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 Gene3D - 19 46 - -
Amo01g3904 165 Gene3D Peroxidase, domain 2 47 160 - -
Amo01g3904 165 PRINTS Plant peroxidase signature 68 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 PRINTS Plant peroxidase signature 143 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 PRINTS Plant peroxidase signature 22 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 PRINTS Plant peroxidase signature 127 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 SUPERFAMILY Heme-dependent peroxidases 20 158 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 ProSitePatterns Peroxidases proximal heme-ligand signature. 69 79 IPR019793 -
Amo01g3904 165 PANTHER PEROXIDASE 25-RELATED 20 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3904 165 PANTHER PEROXIDASE 20 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3904 Amo-Chr1 112583047 112584658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3904 21 158 Peroxidase AT2G41480 73.188 1.67e-71 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3904 K00430 - gmx:100816487 244.973