Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3855 ATGAATTTGACACCAAGGGGAAGAACACAAGGGCATGTGTTGAACTATGACAGAGATGCAGATTCATTTGTGGAGGAAGATAAGGAGCTTCAGTCAAAGTGGGCTGCAATTGAGAAATTGCCAACTTTCAAAAGGATTAAAACTTCTTTTGTTGATGTTAGTCAGGAGAGTGTGGTTCTAGGAGCAAGAAGCAGCAGCAGAAGAGAAGTAGATGTTACAAAGCTTGGAGCGGTCGAAAAGCGTCTCTTCATTGACAGGCTCATCAAGCATATTGAGAATGACAACCTTCAATTGCTCCAGAAGCTTAGGGAAAGAATGGAAAGAGTCAATGTGAAGTTACCAAGTGTGGAGGTTAAGTACACGAACCTAAGTGTTGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTCCCTACTTTATGGAACTCCTTGTCTAGCCAACTCTCAGGTTTTGTGAAGACTATATCATGCACTACTCAAGGAGCCAATATAAGCATTCTGAATGATGTTAGTGGCATCATAAAGCCATCAAGGCTCACTCTTCTTCTTGGTCCACCAGGGTGTGGGAAAACGACCTTGTTAATGGCACTGGCTGGGAAACTAGAGCAATCTCTCAAGGTTTCTGGAGAAATATCTTACAATGGTCAGAATCTAGATGAATTTGTACCTCGAAAAACATCAGCTTACATAAGCCAGTATGACCTGCACATTCCTGAGATGACAGTGAGAGAAACAATCGACTTTTCAGCACGCTGTCAAGGAGTTGGAAGCAGGGCTGACATGGTAGCTGAAATCACCAGGAGGGAAAAGGAAGAAGGAATCATCCCTGATCCTGATATTGATACCTATATGAAGGCAATTTCAGTTGAAGGACAAAGTGAAAATCTTCAGACAGAATATGTTTTGAAGATTCTGGGACTGGATATCTGTGCGGACGTACTAGTTGGTGATGCATTAGAGAGAGGAATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTTGGTCCAATCAAAACTCTTTTCATGGATGAAATATCAACTGGCTTGGACAGCTCAACAACTTTCCAAATAGTTACTTGTCTCCAGCAGTTGGTGCACATCACTGATGCAACTGCAGTGCTTTCACTCCTTCAACCAGCACCTGAAACCTTTGAATTATTCGATGATCTCATATTGATGGCAGAGGGGAAGATAGTATACCACGGCCCATGCAGTCAAGCACTCCAGTTTTTCAAGGATTGTGGTTTCTGGTGCCCAGAAAGAAAAGGGGTTGCAGACTTTCTTCAAGAGGTAATATCCAAGAAGGATCAAAGGCAATACTGGTACCGCACGGATATTCCTTACAGTTATGTCTCAGTGGATCAGTTCTCCGAAATCTTCAAAAGCAGTTACTGGGGACGGATGCTAGGTGATGAGCTTGCACAGCCATTTGATAAATCTCAATCTCATAAAAATTCTTTATCACATAGCGTGTACTCCTTGGGAAAGTGGGAAATCTTTAAAGCTTGTATGAGGAGAGAACTTCTTCTCATGAACCGGAACTCATTTATCTATGTATTCAAAACTGCCCAGCTTACAATCACCGCAATCATCACAATGACGGTGTTCTTACGGACTCAACATGGCGTGGACTTGATAAGTTCAAACTATTTATTGGGATCATTGTACTATACACTCGTCCGCCTCATGACTAATGGAGTTGCTGAGCTGATCATGACCATTACTAGGCTTCCTGTTGTTTATAAGCAGACAGCATTCTATCTTTATCCGGCATGGGCTTATTGTCTTCCAGCTTCCCTTATAAAGATTCCATTTTCGTTTCTTGATGCCATTGTTTGGACATCAGTGACATATTATGTTATTGGCTACAGCCCTGAAATAACAAGGTTTCTCCGCCAGTTTATTTTGCTTGTTGCTCTGCATATGTCATCAACCTCCATGTGCCGTTTCCTTGCTGGAGTTTTCAAAACTGATGTTGCAGCCACAACTGTTGGCTCCTTGGTTTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTACCATGGTGGTTGAGATGGGGATTTTGGCTTTCTCCCATGACATATGGGGAAATAGGAATAACACTAAATGAATTTCTCGCTCCTCGCTGGCAGATCAAAGATGGAAACACCACCGTGGGAAGGAGGGTTCTAAGTGATCGTGGTTTAGACTTTGAGAGCAACTTCTACTGGATATCAATTGGAGCCTTGCTTGGTTTCGCAGTAGTTTTTGATTTTGGATTTATCCTAGCATTAACTTACTTAAAACAGCCTAAGGCATCTCGAGCCTTAGTTTCAAAAAAGAAGGTATCTCAACTAAATGGAGAAGAAAATAGCAATAGCGTGGAGCTCAAAAATAAATCAGTTGCAGTTGATATTGGCAGCACATCAAATGAAACTCAAAGCACAGGGAAAATGGTCCTGCCCTTTCAGCCTCTGACAATAGCATTTAAGGATGTCCAGTATTTTGTTGAAACCCCACCGGAAATGAAAAAGCATGGGTCAAATGAGAAAAGATTACAATTGCTCTGTGATATCACCGGAGCCTTTAGGCCAGGAGTTCTCACTGCACTAATGGGAGTAAGTGGAGCAGGAAAGACAACTCTCATGGATGTCCTTTCAGGAAGGAAAACTGGAGGTATCATTGAAGGAGATATCAGAATTGGAGGATACCCCAAAGTGCAGAAGACATTTGCGCGAGTTTCAGGTTATTGTGAGCAGAATGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCACATACTCGGCTTGGTTGCGGTTGCCGATGGAGATTGATACAGCAACAAAAGGGAAATTTGTTGAAGAAGTGCTTGAAACAATTGAACTTGATGACATAAAAGACAGTTTAGTTGGCATTCCTGGCCAAAGTGGCTTGTCAACTGAACAACGCAAAAGACTAACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACCTCAGGCTTGGATGCCCGAGCAGCCGCAGTGGTTATGCGTGCAGTGAAGAATGTTGTTGGCACTGGCAGGACAACGGTTTGCACCATACACCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAAGCTGGAGGACGGATTATTTATAGCGGAATGCTGGGCCATCATTCAAATAAACTGATTGAATATTTTCAGAATATACCTGGGGTGCCAAAAATAAAAGACAACTATAATCCTGCAACCTGGATGTTGGAAGCTACCTCTGCATCTATAGAACAAGAACTTCAAATTGACTTTGCAACAATCTACAAAGAATCACACCTTTACAGGGAAACTATTCAAATGGTGGAGGAGTTAAGTAAACCAGTGCCAGGTTCAAGCGACTTGCACTTTTCAACTCCTTTCCCACAGAATACCTTGGGGCAGTTCATGGCATGCCTTTGGAAGCAACACTTGTCATATTGGAGAAGTCCTGAGTACAACTTAACACGTTTTATTTTCATGGTTGTTGCAGCAGTAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAAGAAATAAACAATCAGCAAGACTTGTTCAATATATTTGGATCAATGTATATTGCTGTAATATTCTTGGGCGTAAATTACTGTTCAACAATTCTGCCATATGTGGCAACCGAGCGCTCAGTCTTGTACCGAGAAAAATTTGCTGGAATGTATTCTTCCATAGCTTATTCATTTGCACAGGTGGCCATTGAAATACCTTATATCTTAGTGCAAGCAATTTTATATGTGGGAATCACATACCCAATGATAGGTTTTGAGTGGTCAGTTGCAAAAGTCTTTTGGTACTTCTACACCACATTTTGCACATTTTTGTACTTTGTATATCTTGGAATGCTGATAATGTCGTTGAGCACAAATCTGGATATAGCTTCTGTATTGTCAACTGCAGTCTACACCATATTCAATCTCTTCTCTGGATTCCTCATGCCAGGACCTAAAATTCCTAAATGGTGGGTCTGGTGCTACTGGATTTGCCCAACAGCATGGTCCCTGAATGGACTCCTAACATCACAATATGGGGACATGGACAAGGAGATAACCATATTTGGGAAGAAAGAACAAGTTGGTGCATTCCTAAAAGATTACTATGGGTTCAGGCATGACAGATTAAGCCTTGCGGCAGTAGTGCTCATTGCTTTCCCAATTCTTTATGCTTCTCTCTTTGCCTATTGCATAGGCAAAATGAATTTCCAAAAGAGATAG 4293 0.4153 MNLTPRGRTQGHVLNYDRDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDVSQESVVLGARSSSRREVDVTKLGAVEKRLFIDRLIKHIENDNLQLLQKLRERMERVNVKLPSVEVKYTNLSVEAECEVVQGKPLPTLWNSLSSQLSGFVKTISCTTQGANISILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLEQSLKVSGEISYNGQNLDEFVPRKTSAYISQYDLHIPEMTVRETIDFSARCQGVGSRADMVAEITRREKEEGIIPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDICADVLVGDALERGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPCSQALQFFKDCGFWCPERKGVADFLQEVISKKDQRQYWYRTDIPYSYVSVDQFSEIFKSSYWGRMLGDELAQPFDKSQSHKNSLSHSVYSLGKWEIFKACMRRELLLMNRNSFIYVFKTAQLTITAIITMTVFLRTQHGVDLISSNYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQTAFYLYPAWAYCLPASLIKIPFSFLDAIVWTSVTYYVIGYSPEITRFLRQFILLVALHMSSTSMCRFLAGVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPWWLRWGFWLSPMTYGEIGITLNEFLAPRWQIKDGNTTVGRRVLSDRGLDFESNFYWISIGALLGFAVVFDFGFILALTYLKQPKASRALVSKKKVSQLNGEENSNSVELKNKSVAVDIGSTSNETQSTGKMVLPFQPLTIAFKDVQYFVETPPEMKKHGSNEKRLQLLCDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVTYSAWLRLPMEIDTATKGKFVEEVLETIELDDIKDSLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVGTGRTTVCTIHQPSIDIFETFDELILMKAGGRIIYSGMLGHHSNKLIEYFQNIPGVPKIKDNYNPATWMLEATSASIEQELQIDFATIYKESHLYRETIQMVEELSKPVPGSSDLHFSTPFPQNTLGQFMACLWKQHLSYWRSPEYNLTRFIFMVVAAVIFGAVFWQKGKEINNQQDLFNIFGSMYIAVIFLGVNYCSTILPYVATERSVLYREKFAGMYSSIAYSFAQVAIEIPYILVQAILYVGITYPMIGFEWSVAKVFWYFYTTFCTFLYFVYLGMLIMSLSTNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDMDKEITIFGKKEQVGAFLKDYYGFRHDRLSLAAVVLIAFPILYASLFAYCIGKMNFQKR* 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3855 1430 PANTHER ATP-BINDING CASSETTE TRANSPORTER 2 1430 - -
Amo01g3855 1430 Pfam ABC transporter 167 349 IPR003439 GO:0005524
Amo01g3855 1430 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 2 1430 - -
Amo01g3855 1430 CDD ABCG_PDR_domain2 827 1065 IPR034003 -
Amo01g3855 1430 Gene3D - 151 417 IPR027417 -
Amo01g3855 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 424 IPR027417 -
Amo01g3855 1430 Pfam ABC transporter 860 1010 IPR003439 GO:0005524
Amo01g3855 1430 Coils Coil 99 119 - -
Amo01g3855 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 855 1065 IPR027417 -
Amo01g3855 1430 Gene3D - 844 1078 IPR027417 -
Amo01g3855 1430 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 424 IPR003439 GO:0005524
Amo01g3855 1430 Pfam Plant PDR ABC transporter associated 722 780 IPR013581 -
Amo01g3855 1430 SMART AAA_5 867 1059 IPR003593 -
Amo01g3855 1430 SMART AAA_5 176 409 IPR003593 -
Amo01g3855 1430 Pfam ABC-2 type transporter 504 714 IPR013525 GO:0016020|GO:0140359
Amo01g3855 1430 Pfam ABC-2 type transporter 1156 1368 IPR013525 GO:0016020|GO:0140359
Amo01g3855 1430 Pfam ABC-2 type transporter 382 441 IPR043926 GO:0140359
Amo01g3855 1430 Pfam ABC-2 type transporter 1039 1100 IPR043926 GO:0140359
Amo01g3855 1430 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 830 1082 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3855 Amo-Chr1 111957308 111965443 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3855 855 1042 Calmodulin-binding Proteins AT2G36910 28.571 3.84e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3855 K08711 - gmx:100779615 2496.46