Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3830 ATGTTGAAAAGAGGCAACAGTTTTGGAGCCATGAGGATGCTATGCTGGGGGTTTGGGTTTATAGGGTTCATGTTTGTGAAATTGGTACAAGGATTTGAGAATGGTAATGTCACAGATATGCTGTATTTCAATAATAACAGACCTTTGATGGTTGGTCTTACTCTTATTTATGGTGCTGCCGCCAAAGGAGCTGTATGTCTTGATGGATCTTTACCAGGTTACCACTTCCACCGCGGATATGGCGCCGGATCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAAATGTCAGAAATTGCATTTATAGTAAGAAGACGCGGCATGGTTCGTCGGCGTTTATGGAAAAACAGATACCATTTGTTGGGATATTAAGCAACAAAGCTTGGGAAAACCCAGATTTCTACAATTGGAATAGAATAAAAATTCGTTATTGTGATGGTGCATCGTTTACTGGAGACAGTCAAAATGAGCGAGCAGGGTTGTTTTTCAGAGGGCAACGCATCTGGCTCGCTGCTATGGAAGATCTAATGTCGAAAGGAATGCGCTATGCTAAGCAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTGGCAACTATTCTACATTGTGATGAATTCAAGGAAATGTTYCCAAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTGTTCCTTGACGCTGTTGATGTATCCGGCCATCGCAGTTTGAGGAATTTGTTTGGAGGTGTGGTTGCCTTACAGGGAGCACAAAGAAACCTTCCRAGGACTTGTACCAGTCGCCTCAATCCAATTTTGTGCTTTTTCCCTCAGCACTCAATTGCCAGTGTTAAGGCACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCAAGTCTAGCTCCACCATCTGCTGACTATCACTGGAATTGGTATGATTGCAGAAAAAATTACGCGCGTTGCAGCGCGCCTCAAATGCAATATCTGCAAGGTTTTCGGAATCAGATGCTAAGAGCTGTAAGAAGATTCTCGAAGTTGCGTAAAAACGGGTTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCCGAAAGACAGGATACATGGTTTGCTCGCGACTCTCCCCATATTGGAAATCGAGGGATAGCACAGTCTGTTGGAAACTGGTATTTCGATCGAGTTCAAGTTCAGGCCATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAATTGA 1245 0.4337 MLKRGNSFGAMRMLCWGFGFIGFMFVKLVQGFENGNVTDMLYFNNNRPLMVGLTLIYGAAAKGAVCLDGSLPGYHFHRGYGAGSNSWLIQLEGGGWCGNVRNCIYSKKTRHGSSAFMEKQIPFVGILSNKAWENPDFYNWNRIKIRYCDGASFTGDSQNERAGLFFRGQRIWLAAMEDLMSKGMRYAKQALLSGCSAGGLATILHCDEFKEMFPRTTRVKCLSDAGLFLDAVDVSGHRSLRNLFGGVVALQGAQRNLPRTCTSRLNPILCFFPQHSIASVKAPLFLLNAAYDTWQIQASLAPPSADYHWNWYDCRKNYARCSAPQMQYLQGFRNQMLRAVRRFSKLRKNGLFINSCFAHCQSERQDTWFARDSPHIGNRGIAQSVGNWYFDRVQVQAIGCPYPCDKTCHNLVFN* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3830 414 Pfam Pectinacetylesterase 46 393 IPR004963 GO:0016787
Amo01g3830 414 PANTHER PECTIN ACETYLESTERASE 18 413 - -
Amo01g3830 414 PANTHER NOTUM-RELATED 18 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3830 Amo-Chr1 111614640 111618280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3830 43 413 Carbohydrate Esterase AT1G57590 69.272 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3830 K19882 - gmx:100791571 731.865