Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3823 ATGGCTACGCCGAATCCAGTAACAGCAGCAGCACCACCAGCATGTCCAGCACCAATGAAAGCCACGTCCAATGGGGCGTTCCACCATGAAAATCCTCTTGACTATGCTCTTCCATTGCTAATTGTTCAAATATGTATCGTTGTTGGCTTCACCAGATTCCTTGCATTCCTTTGCAAACCCCTTAGACAGCCTAGAGTTATTGCAGAGATCATCGGAGGATTACTGCTAGGACCATCTGCATTTGGACGAAACCAGAAGTTCCTAAACACAATCTTTCCAAAGAAGAGCTTAACAGTTCTGGACACCATAGCCAATGTAGGTCTCTTGTTCTTCTTGTTTCTCGTTGGTCTTGAGCTTGATGTCCGCTCCATTAAGCGTACTGGGCCAAAGGCCTTAGCCATTGCCGTGTGCGGCATCACTTTCCCTTTCCTTCTCGGCGTTGGAACCTCTTTTGTTCTCAGAGCAACCATCTCACAAGGTGTTCAGCCACTTGCCTTCATTGTTTTCATGGGCGTGGCTCTATCTATCACTGCCTTCCCTGTCTTGGCTCGAATCCTCGCCGAGCTCAAGCTTCTAACCACTGATGTTGGAAGCATTGCCATGTCTGCGGCTGCAGTGAATGATGTTGCAGCATGGATACTCTTAGCTCTTGCAATAGCTGTCTCCGGTGACAACACTTCTCCGATAATCTCTCTTTGGGTTCTGCTTTGTGGTGCCGGTTTTATACTCTTTGCTGTGTATGGCATAAGGCCTTTGCTGGTGATAATGGCGAAGCATTCGCTGTCTGGGGAGCCGGTTAAAGAGACCTACATATGCTTCACGTTGACGTTGGTTTTGGCTTGTAGTTTTCTGACCGATACAATTGGTATCCATGCTCTGTTTGGTGCATTTGTGGTTGGTATAATTGTCCCAAAAGATGGTCCTTTTGCTGGGGTTTTGATTGAGAAGATTGAAGACTTGGTCAGTGGGATTTTCTTGCCACTATATTTTGTGTCTAGTGGGTTGAAGACAAATGTGGCTACTATTAGTGGAGGCACTTCTTGGGCATTGCTTGCACTTGTTATTTTCAATGCTTGCTTTGGAAAGATTGTTGGCACTGTTGTGGTGTCACTCTCATGTAAGGTGCCTTTTAGAGAATCATTGGCACTTGGCTTTCTCATGAACACTAAGGGTTTGGTAGAGCTCATTGTTCTTAACATTGGAAAGGATCGCAAGGTGCTGAACGACCAAGCATTTGCAATTTGTGTTCTGATGGCACTTTTCACCACCTTCATCACGACCCCAATAGTGATGGCAGTGTACAAGCCAGCTCGGAGAGGAGCACCATACAAACACAAAACAATCCAGCGCAAGGATCTGGACACAGAGCTGAGGATGCTGGCATGTTTCCACAGCACACGCAGCATCCCAACCTTGCTGAACCTCATCGAATCTTCCCGCGGAACCAAGAAGTTTGGGAAGCTTTGCATTTACGCCATGCACCTTATGGAGCTCTCAGAGCGCTCCTCTGCCATCACTATGGCCCACAAGGCACGCAGGAACGGCCTTCCTTTCTGGAACAACAAACCCGACGACGCCAACGCCAACAACGATCACATGATCATTGCTTTCCAGGCTTACGGAAAACTCAACAAGGTTAACGTTCGTCCCATGACTGCTATCTCTGATCTCGCTAACATCCATGAAGATATCTGCACTAGCGCTCACCAAAAGCGTGCTGCAATGATCGTCCTTCCATTCCACAAGCACCAACTCGTTGATGGATCCATGGAGTCTCTGGGAAGCTCGTTCCGTCACATGAACGAGCTTGTTTTGAGCCACGCTCCTTGCTCTGTAGGGATCTTGGTTGACCGTGGACTAGGCGGCGCAAGCCAGGTTCAAGCATCTGACGTGTCATACAACATAGTTGTGTTGTTCTTCGGTGGACGTGATTGTAGAGAAGCACTTTCTTATGGTATGAGGATGGCACAGCACCCGGGTATCTCGCTGACGGTTGTTAAGTTTGTTACAGCACCGGGGAAGAGCCTGGCCTTCGGGGCGAAGCTTGTGGCTGTGTCAGTAGACAAGCAACAGAAAGTGGTTACAGAGATTGATGAAAACGAAAAACAGTTAGACGAGGAGTTGTGGAACGAGTTCTTGGGGAAGTCAATCAAGTATGAGGAGAGACTAGTGGATAGCCGAAACGACATTGAGGCTGCTTTGAGGGAGATGAGTAGGTCCAGCCTTATTTTGGTTGGTAGAATGCCATCCGTTGCACCCTTGGTTTACAACAGTGACTCTGCTCAACTTGGCCCTGTTGGAAGCTTCTTGGCTTCTTCGGAATTCTCAACCACTGCGTCTGTTGTTGTTATCCAACAGTACAATCCAGCTGCTGATGCTCACCCACTCGTCATGGAGGAAATTGATCAACTTGAGGAGCCTGATACCCCGCTCTGA 2436 0.4807 MATPNPVTAAAPPACPAPMKATSNGAFHHENPLDYALPLLIVQICIVVGFTRFLAFLCKPLRQPRVIAEIIGGLLLGPSAFGRNQKFLNTIFPKKSLTVLDTIANVGLLFFLFLVGLELDVRSIKRTGPKALAIAVCGITFPFLLGVGTSFVLRATISQGVQPLAFIVFMGVALSITAFPVLARILAELKLLTTDVGSIAMSAAAVNDVAAWILLALAIAVSGDNTSPIISLWVLLCGAGFILFAVYGIRPLLVIMAKHSLSGEPVKETYICFTLTLVLACSFLTDTIGIHALFGAFVVGIIVPKDGPFAGVLIEKIEDLVSGIFLPLYFVSSGLKTNVATISGGTSWALLALVIFNACFGKIVGTVVVSLSCKVPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRKDLDTELRMLACFHSTRSIPTLLNLIESSRGTKKFGKLCIYAMHLMELSERSSAITMAHKARRNGLPFWNNKPDDANANNDHMIIAFQAYGKLNKVNVRPMTAISDLANIHEDICTSAHQKRAAMIVLPFHKHQLVDGSMESLGSSFRHMNELVLSHAPCSVGILVDRGLGGASQVQASDVSYNIVVLFFGGRDCREALSYGMRMAQHPGISLTVVKFVTAPGKSLAFGAKLVAVSVDKQQKVVTEIDENEKQLDEELWNEFLGKSIKYEERLVDSRNDIEAALREMSRSSLILVGRMPSVAPLVYNSDSAQLGPVGSFLASSEFSTTASVVVIQQYNPAADAHPLVMEEIDQLEEPDTPL* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3823 811 Gene3D - 39 441 IPR038770 -
Amo01g3823 811 Gene3D - 522 749 - -
Amo01g3823 811 PANTHER CATION/H + ANTIPORTER 12 808 - -
Amo01g3823 811 PANTHER CATION/H+ EXCHANGER 3 12 808 - -
Amo01g3823 811 Pfam Sodium/hydrogen exchanger family 46 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3823 Amo-Chr1 111555162 111558273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3823 15 803 Antiporter Super Family AT3G17630 69.066 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3823 - - lang:109362195 1233.39