Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo01g3821 | ATGGCTTGTTTGAAACCTGATGAGTTGGAGCTTGTTGGGAGAGGAGAGCAAGGTTCTCATCATGCTATGGAAAGAATTGGTGATGCTAATGTTGGTTCCAACAACAACAACATGGCTGATGATGCTTCTATGATGCATTTTCCTGCTAACTGGCCAATGCCAGCATCTGGACTGAATGCATCAGCGCCAACTCATTTTACCATCTTATTCAATGGGAACACTTATGTCTATGATGGAATTAATACAGAGAAGGTGCAAGAGATAATGCTTATTGCTGCTGCATATGCCAAGTCTGCTGAAGTGAAAATTGGGACACAATCTTCATTCACTCCACTCATTCCCACTTCCACAAGTTCTTCTCCTGCACAAAGAAACTCCAACAACTTGCCTTCAAAACAATCTGTCTGCTTTCCTGCAGAAAAGAGTTCCATTTGCAGGCTGCAAGAATTTCCGTTAGCACGTAGACAATCTCTTCAGAGGTTTCTTGAGAAGCGACGAGTCAGGTTGTTTAGCAAAGCCCCTTATGGTTTCTCAAAAAACATGGCTGGCCTCTATGATGACAATAGTCCAGGGAACATAGAGAACAGCTTTTATGATGACAATAGTCCACAAGATTTTGCTTCTTAA | 627 | 0.4211 | MACLKPDELELVGRGEQGSHHAMERIGDANVGSNNNNMADDASMMHFPANWPMPASGLNASAPTHFTILFNGNTYVYDGINTEKVQEIMLIAAAYAKSAEVKIGTQSSFTPLIPTSTSSSPAQRNSNNLPSKQSVCFPAEKSSICRLQEFPLARRQSLQRFLEKRRVRLFSKAPYGFSKNMAGLYDDNSPGNIENSFYDDNSPQDFAS* | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo01g3821 | 208 | PANTHER | DIVERGENT CCT MOTIF PROTEIN | 18 | 183 | - | - | |
Amo01g3821 | 208 | PANTHER | PROTEIN TIFY 4A-RELATED-RELATED | 18 | 183 | IPR040390 | - | |
Amo01g3821 | 208 | Pfam | tify domain | 61 | 93 | IPR010399 | - | |
Amo01g3821 | 208 | MobiDBLite | consensus disorder prediction | 112 | 131 | - | - | |
Amo01g3821 | 208 | SMART | tify_2 | 59 | 94 | IPR010399 | - | |
Amo01g3821 | 208 | ProSiteProfiles | Tify domain profile. | 59 | 94 | IPR010399 | - | |
Amo01g3821 | 208 | Pfam | Jas motif | 151 | 175 | IPR018467 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo01g3821 | Amo-Chr1 | 111534131 | 111537666 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo01g3821 | 63 | 175 | Tify Gene Family | AT5G20900 | 43.860 | 1.23e-21 | 86.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Tify | Amo01g3821 | tify | 7.9e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo01g3821 | K13464 | - | gmx:100306655 | 141.354 |