Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3774 ATGGAAGTTGATTCATCCTTGGTGTTCATCATAACAAGTTTCCTCATCTCTGCACTATTGCTATGGCTTGCAAAGAAGGGTAAGAGTGTCCATAAAGTGCCACCTGGGCCATGGAAACTACCTCTCATAGGGAACCTGCATCAACTTGCAGGCTCACTTCCACACCATGCTCTCAGAAAACTAGCAAACAAACACGGTCCACTCATGCACCTTCAACTGGGTCAGAATTCTCTAGTGATTGTCTCATCCCCCAACATGGCCAGAGAAATCATGAAGACTCATGATCTTGCTTTTGCAGACAGGCCTGAGTTCCTTCCTTCCAAGATCATGGCATACGGATCAATAGACATTGCGTTCGCTCCCTATGGCCAATACTGGAGACAGATGAGGAAGATATGTACACTTGAGGTTCTAAGTTCAAAGAAGGTTCAGTCTTTCTCCTTTATCCGAGAAGAGGAGGTAGCTAACACAGTAGAAACAATTCGCACAGCTGCTGGTGCAACCATCAATCTCAGTAAAATGATTAACAATCTGATAAGCACTGTGGTTTCTAGAGCTGTGTTTGGCAACATATCAGAAGACCATGAACAGTTTGTGTCCTTTGTGAAGGAATCAATAGCGTTATCCGATGGATTTGACCTTGCAGATTTGTTTCCTTCCTTGAAGCCTCTGCATTTCATCACTGGTTTTGAAGCCAAACTGAAGAAGATGCATGTAAAGGTCGACAAGATCTTGGACAAGATCATAAAGGAGAATGAAGCAAGGAAATTGGAAGGTACAAACCAACAAGAACAAGAAGAAAAGAATGAGAATCTCGTTGAGGTTCTTTTAAGAGTCTTACATAGTGGCACCCTTGACACCCAAATTACGCTCAACAATGTCAAAGCAGTCATTTGGGACATATTTGCTGGTGGAACAGACACTTCAGGAGTAGTCATAGAGTGGGTTATGTCGGAATTGATGAGAAGCCCAAGAGCTATGAAGAGGGCACAGGCTGAGATTCGACAAGCCTTGAAAGAAAAGCAAACAATCCGGGAGGAAGATGTAACAAAGCTTCCCTACTTGAAGGCTGTGATCAGCGAAACAATGAGGTTACACCCACCTGTTCCTCTGTTGCTTCCAAGACAATCCAGAGAAGAGTGCACCATTCATGGATACCATATACCGATCAAGACTAAAGTGATGGTAAATGCGTACGCGCTCGGAAGAGATCCGGATTATTGGTACGATGCAGAAACCTTCCTGCCAGAAAGATTTCAGGAAACTCCTATGGATTTCAAAGGGACAAACTTTGAGTACATCCCTTTTGGAGCTGGAAGGAGAATTTGTCCAGGACTTAACTTTGGTTTAGCTAATGTGGAGTTTGCTCTAGCTATGCTACTCTACCACTTCAACTGGGAGCTTCCTAATGGAATTAAGCCAGAGGATTTGGATATGAATGAGGCACAAGGAGCTGTGGTTGGAAGGAAAAATCACCTTTACTTGATTCCCACACCTTACCATTATTAG 1509 0.4347 MEVDSSLVFIITSFLISALLLWLAKKGKSVHKVPPGPWKLPLIGNLHQLAGSLPHHALRKLANKHGPLMHLQLGQNSLVIVSSPNMAREIMKTHDLAFADRPEFLPSKIMAYGSIDIAFAPYGQYWRQMRKICTLEVLSSKKVQSFSFIREEEVANTVETIRTAAGATINLSKMINNLISTVVSRAVFGNISEDHEQFVSFVKESIALSDGFDLADLFPSLKPLHFITGFEAKLKKMHVKVDKILDKIIKENEARKLEGTNQQEQEEKNENLVEVLLRVLHSGTLDTQITLNNVKAVIWDIFAGGTDTSGVVIEWVMSELMRSPRAMKRAQAEIRQALKEKQTIREEDVTKLPYLKAVISETMRLHPPVPLLLPRQSREECTIHGYHIPIKTKVMVNAYALGRDPDYWYDAETFLPERFQETPMDFKGTNFEYIPFGAGRRICPGLNFGLANVEFALAMLLYHFNWELPNGIKPEDLDMNEAQGAVVGRKNHLYLIPTPYHY* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3774 502 Coils Coil 247 270 - -
Amo01g3774 502 Pfam Cytochrome P450 34 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 Coils Coil 327 347 - -
Amo01g3774 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Amo01g3774 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 SUPERFAMILY Cytochrome P450 34 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3774 502 PANTHER CYTOCHROME P450 71D8 9 501 - -
Amo01g3774 502 PANTHER OS08G0105600 PROTEIN 9 501 - -
Amo01g3774 502 Gene3D Cytochrome P450 26 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3774 Amo-Chr1 110953189 110963773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3774 6 500 Cytochrome P450 AT3G26300 40.476 1.52e-136 402