Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3773 ATGGAAGTTAGTTCATCCATGGTGTTTATCATAATAAGCTTCCTCATCTCTGCGGTATGGCTATGGCTTGCAAAGAAGGGTAAGAGTGTCCATAAAGTACCACCTGGGCCATGGAAACTACCTCTCATAGGGAACCTCCATCAACTTGCAGGCTCATCACTTCCACACCATGCTCTCAGAAAACTAGCAAACAAACACGGTCCACTCATGCACCTTCAACTGGGTCAGATTTCTGCAGTGATTGTTTCATCCCCCAATATGGCCAGAGAAATCATGAAGGCTCATGATCTTGCTTTTGCAGACAGGCCTGAGTTCCTTCCTTCCAAGATCATAACCTATGGATCAACAGACATTGCATTCTCTCCCTATGGTGAATACTGGAGACAGATGAGGAAGATATGCACACTTGAGCTTCTAAGTTCTAAGAAGGTTCAGTCTTTCTCCTTTATCCGAGAAGAGGAGGTAGCTAACATGGTAGAAACAATTCGCAAATCCGCAGGTGCAACCATCAATCTCAGTAAAATGATTAACAATCTCATAAGCACTGTGATTTCTAGAGCTGTTTTTGGCAACATATCCGAAGACCATGAACAGTTTGTGTCCTTTGTGAAGAAGACAATAGCGTTATCCGATGGATTTGACCTTGCGGATTTGTTTCCTTCCTTGAAACTTCTGCATTTCATCACTGGTTTTGAAGCCAAATTGAAGGAGATGCATGTCAAGATTGACAAGACCTTAGACAAGATCATAAAGGAGAATGAAGCAAGGAAATTGGAAGGTAAACACCAGCAAGAACAAGAAGTAAAGAATGAGAATCTTATTGAGGTTCTTCTAAGAGTCCAACATAGTGGCACCCTTGACACCCAAATTACAATGAACAATGTCAAAGCAGTCATTTGGGACATATTTGCTGCTGGAACAGACACTTCAGGAGTAGTTATAGAGTGGGTTATGTCGGAATTGATGAGAAGCCCCAGAGCTATGAAGAAGGCACAGACTGAGATTCGAAAAGCCTTGATAGAGAAGCAAACAATCCAGGAGGCAGATGTTGCAGAGCTTCCCTACTTGAAGGCTGTGGTCAGCGAAACAATGAGGTTACACCCTCCTCTTCCTCTGTTGCTTCCAAGACAATCCAGAGAAGAGTGCACCATCCATGGATACCATATACCAATCAAGACTAAAGTCATGGTAAATGCATATGCACTCGGAAGAGATCCCGATTACTGGTATGATTCGGAAACCTTCCTACCAGAAAGGTTCCAGGACACTCCTATGGATTTCAAAGGATCAAACTTCGAGTACATCCCTTTTGGAGCAGGAAGGAGAGCTTGTCCGGGACTTACCTTCGGTTTAGCCAATGTGGAGTTTGCTCTAGCTATGCTACTCTACCACTTCAACTGGGAACTCCCTAAAGGAATTAGGCCAGAAGATTTGGATATGGACGAAGCACAAGGAGCTGTGGTTGGAAGGAAAAACCACCTCTACTTGATTCCCACACCTTATCATTTTTAG 1512 0.4345 MEVSSSMVFIIISFLISAVWLWLAKKGKSVHKVPPGPWKLPLIGNLHQLAGSSLPHHALRKLANKHGPLMHLQLGQISAVIVSSPNMAREIMKAHDLAFADRPEFLPSKIITYGSTDIAFSPYGEYWRQMRKICTLELLSSKKVQSFSFIREEEVANMVETIRKSAGATINLSKMINNLISTVISRAVFGNISEDHEQFVSFVKKTIALSDGFDLADLFPSLKLLHFITGFEAKLKEMHVKIDKTLDKIIKENEARKLEGKHQQEQEVKNENLIEVLLRVQHSGTLDTQITMNNVKAVIWDIFAAGTDTSGVVIEWVMSELMRSPRAMKKAQTEIRKALIEKQTIQEADVAELPYLKAVVSETMRLHPPLPLLLPRQSREECTIHGYHIPIKTKVMVNAYALGRDPDYWYDSETFLPERFQDTPMDFKGSNFEYIPFGAGRRACPGLTFGLANVEFALAMLLYHFNWELPKGIRPEDLDMDEAQGAVVGRKNHLYLIPTPYHF* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3773 503 Gene3D Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Amo01g3773 503 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PANTHER CYTOCHROME P450 71D8 10 502 - -
Amo01g3773 503 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 PANTHER OS08G0105600 PROTEIN 10 502 - -
Amo01g3773 503 Pfam Cytochrome P450 34 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g3773 503 Coils Coil 328 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3773 Amo-Chr1 110933406 110935211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3773 6 501 Cytochrome P450 AT3G26300 40.000 1.04e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3773 - - gmx:100800554 667.151