Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3726 ATGGTGATTGAGGATGTCGATATATCACCGGCAAGAGCGGCGGATGTGGTCACGGAGACGGTTGCGAGCAAAGCGGAGCAGGCGGCAGGGCTGGGAATTCTGCTGCAGATCATGATGCTGGTGCTGGCCTTCGTGCTTGGCCATGTCCTCCGCCGCAAGAAGATTTACGTGGTTCCGGAGGCCAGCGCCTCCCTCCTCATCGGCCTGCTTGTCGGCGTCCTCGCCAACATCTCCCACACTCAGACCAGCATCAGAGCCTGCCTCGCACCGCAACCTTTCTTCTCTAATTTTGGAGCCATTATCACCTTTGCTATATTCGGTACCTTTCTAGCTTCTGTTGTAACTGGTGTCCTTGTTTTCCTTGGTGGATTTATACACCTCGTGTACGGACTACCTTTCGTTGAGTGCCTAATGTTTGGTGCTCTTATCTCTGCAACTGATCCAGTTACCGTTCTCTCCATATTTCAGGAGCTTGGCACTGATGTCAATTTGTATGCCCTGGTTTTTGGAGAGTCTGTTCTGAATGATGCTATGGCTATTTCATTGTACAGAACAATGTCACTGGTTAAAACTCATCCATCTGGACAGAACTTATTCATGGTGGTTGTTAGATTCTTGGAGACTTTTGTTGGGTCGATGTCTGCTGGGAAGTTTTCGGTTTTATCTAGCCTTCAGAACTTGGAGAGCTGTCTTTTTGTACTTTTCCCATATTTCTCGTACATGCTTGCAGAAGGTCTTGGCTTGTCTGGTATTGTATCAATATTGTTCACGGGAATGGTCATGAAGCACTACACGTATTCAAACTTGTCTAGAAGTTCTCAGAGATTTGTCTCTTCTTTCTTCGAGTTAATATCATCATTAGCAGAGACATTTGTATTTATATACATGGGGATTGATATTGCCATGGAGAAACATAGCTGGTCACATGTTGGATTTATTTGCTTCTCAGTTATATCCATTGGAATTGCAAGGTATTTGAGCTCCAGACTTCGAGGAGCAATGGCCTTTGCCCTTGCTCTACAATCAGTTCATGATCTTCCTGAAGGACATGGGCAGACCATATTCACTGCAACTACAGCAATTGTCATGTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTTTAGAAGTTGTAGGTGGTGAAATTAATAGCAAGGAGAGCCCTTTGCCTTCAGGTGAGATCACAAAGTTTGAGGAAAGCAATGGCAGCTATGTTTCTCCTCAGAAGGAAGAATTATCACCAGGGAGCAAAATCAAGTTGAAGCTTCGAGAATTAAACAGTGCTGCATCTTTTAAAGCATTAGATAAGAACTACCTCACCCCATTCTTTACAAGTCAAAACGAAGATGATGAAGAAGAAGAAGTGGTTGAGCTTCTGGCTTCTAGAAGTGCGGGATTCCATGATCCCCAGCAAGAACATTATTCTCCTTTAGGATAA 1452 0.4477 MVIEDVDISPARAADVVTETVASKAEQAAGLGILLQIMMLVLAFVLGHVLRRKKIYVVPEASASLLIGLLVGVLANISHTQTSIRACLAPQPFFSNFGAIITFAIFGTFLASVVTGVLVFLGGFIHLVYGLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKTHPSGQNLFMVVVRFLETFVGSMSAGKFSVLSSLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSRSSQRFVSSFFELISSLAETFVFIYMGIDIAMEKHSWSHVGFICFSVISIGIARYLSSRLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVMLTVLLIGGSTGTMLEALEVVGGEINSKESPLPSGEITKFEESNGSYVSPQKEELSPGSKIKLKLRELNSAASFKALDKNYLTPFFTSQNEDDEEEEVVELLASRSAGFHDPQQEHYSPLG* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3726 483 PANTHER SODIUM/HYDROGEN EXCHANGER 6 328 458 - -
Amo01g3726 483 Gene3D - 133 185 - -
Amo01g3726 483 PANTHER SODIUM/HYDROGEN EXCHANGER 6 15 324 - -
Amo01g3726 483 PANTHER SODIUM/HYDROGEN EXCHANGER 328 458 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo01g3726 483 PANTHER SODIUM/HYDROGEN EXCHANGER 15 324 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo01g3726 483 PRINTS Na+/H+ exchanger signature 140 150 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo01g3726 483 PRINTS Na+/H+ exchanger signature 100 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo01g3726 483 PRINTS Na+/H+ exchanger signature 85 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo01g3726 483 Pfam Sodium/hydrogen exchanger family 91 327 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3726 Amo-Chr1 110462904 110467291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3726 23 372 Antiporters AT3G05030 29.695 1.27e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3726 K14724 - gmx:100810105 638.262