Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3712 ATGCAATTCACAAGAGCTTCTTCAATGGCTGGCTCATGCTTCCATGGGCTTCGCATGCGAAGGTCGAAGAGTAAGCCTTTACCGGAGCTTCCTCCTTCATCGTCTTCCAAGAAAAGGATGAATTCTGACTTAGAGAACATGGAGAGAAAGAGATTTGACAGCTTGGAATCATGGTCCATGATATTGGACTCTGAGAATGTGGAGACATGGGAAGCTTCTAAGGAGGATCAGGAGGAGTGGACTGCAGATTTGTCACAGCTTTTCATAGGGAACAAGTTTGCATCTGGAGCTCACAGTAGAATCTACCGTGGAATTTACAAGCAGAGAGCCGTAGCTGTGAAAATGGTGAGGATCCCGACACAGGACGAGGAGAGAAGATCCTTGCTTGAGCAGCAGTTCAAATCTGAAGTTGCTTTGCTTTCACGTCTCTTTCATCCGAACATAGTTCAGTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTGAACAAGAAAGAGCCATACTCTCTTTCAATTGAAACAATACTAAGGTTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCACTCGCAAGGCGTCATCCACAGAGATCTCAAGTCAAATAACCTTCTTCTCAATGATGAGATGAGGGTTAAGGTGGCAGATTTCGGCACATCTTGTCTCGAAACAAGGTGTCGCGAGACCAAAGGAAACATGGGAACGTATCGTTGGATGGCGCCAGAGATGATTAAGGAGAAACCTTACACTCGCAAAGTTGATGTGTATAGTTTTGGTATTGTGCTTTGGGAACTCACAACTGCTTTACTTCCCTTCCAAGGAATGACCCCTGTCCAAGCTGCTTTTGCTGTTGCTGAGAAGAATGAGAGGCCACCACTGCCGGCGAGTTGCCAGCCAGCACTAGCACACCTCATAAAGCGTTGCTGGGCGGCGAACCCATCGAAGAGGCCGGACTTCAGTGACATAGTGACCACTCTTGAGAAGTACGATGAATGTGTGAAGGAGGGACTTCCCCTAACTCATCATTCAAGACTTGTCAGCAGAAACCTCATTGAACGCTTAAAAGGCTGCGTCTCCATGAGTTCCTCCATACCTGTACATGCTTAA 1152 0.4609 MQFTRASSMAGSCFHGLRMRRSKSKPLPELPPSSSSKKRMNSDLENMERKRFDSLESWSMILDSENVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEERRSLLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVTTLEKYDECVKEGLPLTHHSRLVSRNLIERLKGCVSMSSSIPVHA* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3712 383 SUPERFAMILY Protein kinase-like (PK-like) 65 341 IPR011009 -
Amo01g3712 383 Gene3D Phosphorylase Kinase; domain 1 76 169 - -
Amo01g3712 383 Gene3D Transferase(Phosphotransferase) domain 1 170 367 - -
Amo01g3712 383 PRINTS Tyrosine kinase catalytic domain signature 165 178 IPR001245 GO:0004672|GO:0006468
Amo01g3712 383 PRINTS Tyrosine kinase catalytic domain signature 203 221 IPR001245 GO:0004672|GO:0006468
Amo01g3712 383 PRINTS Tyrosine kinase catalytic domain signature 249 259 IPR001245 GO:0004672|GO:0006468
Amo01g3712 383 PRINTS Tyrosine kinase catalytic domain signature 268 290 IPR001245 GO:0004672|GO:0006468
Amo01g3712 383 PRINTS Tyrosine kinase catalytic domain signature 312 334 IPR001245 GO:0004672|GO:0006468
Amo01g3712 383 SMART serkin_6 87 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3712 383 Pfam Protein tyrosine and serine/threonine kinase 89 341 IPR001245 GO:0004672|GO:0006468
Amo01g3712 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Amo01g3712 383 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 17 372 - -
Amo01g3712 383 CDD STKc_MAP3K-like 94 341 - -
Amo01g3712 383 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 17 372 - -
Amo01g3712 383 MobiDBLite consensus disorder prediction 20 43 - -
Amo01g3712 383 ProSiteProfiles Protein kinase domain profile. 87 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3712 Amo-Chr1 110292163 110295792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3712 9 383 MAP Kinase Kinase Kinase AT1G62400 82.097 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo01g3712 PK_Tyr_Ser-Thr 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3712 - - gmx:100799437 699.508