Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3688 ATGAAATCCTTAAAGCAGAGAGGATGCAAGGCCTTATGCTGCAGCAGTTGTAGGAGGCTTAGTGTGTCTTCCACAGAGGAAGCAGAGAGTTCATCAGCCTCCGATCGGTTTCCTTCCGTGTCGAGCGTCGCACACGCCATGGTGCAAGAGAGACTTGACCAGTTGATTAGGGAGAGGAGGATGGAAGAGAGACAGAGGAGGCAGCAAAGCAGAGCCAGAGAAAGAGAGAGAACTAAGTTTGTTGTGATGGTGGCAATGGAGAAGTGCTCTTATGATCCAAGAGAGGATTTTAGGGAGTCCATGATGGAGATGATAACAGCAAATCGCATCAAAGAAGCCAAAGATCTTCGTAGCCTACTCAACTATTATATCTCCATGAACTCCAATGAGTACCATAGTCTTATACTTGAGCTTTTTCATGAGGTTTGTACTAATTTATTCTTATCATGTAAATGTCATTGGTAG 465 0.4452 MKSLKQRGCKALCCSSCRRLSVSSTEEAESSSASDRFPSVSSVAHAMVQERLDQLIRERRMEERQRRQQSRARERERTKFVVMVAMEKCSYDPREDFRESMMEMITANRIKEAKDLRSLLNYYISMNSNEYHSLILELFHEVCTNLFLSCKCHW* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3688 154 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 148 IPR038933 GO:0045892
Amo01g3688 154 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 84 147 IPR006458 -
Amo01g3688 154 Pfam Transcriptional repressor, ovate 90 147 IPR006458 -
Amo01g3688 154 PANTHER TRANSCRIPTION REPRESSOR-RELATED 6 148 - -
Amo01g3688 154 Coils Coil 45 72 - -
Amo01g3688 154 ProSiteProfiles OVATE domain profile. 86 145 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3688 Amo-Chr1 109926761 109927225 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo01g3688 Ovate 4.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3688 - - gmx:102663136 201.83