Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3676 ATGTTCCCAACCTTGGGAGGGTTTTCTGCCACCGATCCATCCATGTCGTCAGATCATAACAATCGAGCGGTTGTGGGCGAAGTCGACTTCTTCAACACGTCATCATCCTCATCCGTTAAGAACCAGACTTGTACTCATGGAAGCCTTTCCGAGTTTAATCTCCACGTAAATACTGGTCTGCAACTCCTTACTGCCAACAGTAAAAGCGATCAATCTACGGTGGATGATGGGGTTTCATCAGACACTGAAGATAAGCGCCCAAAAACCACCCAGCTGGTACAAGTGCAAGAAGAACTCCAACGTGTGAATTCAGAGAACCAAAAGCTAAAGGAGACGCTCAACCATATGAGAAGTAGCTACATGAATTTGCAAATGCAAGTTGCCGCATTAATGCAACACCAACAGAAACAGCAAGTTTCCGAGACCACCACAGAAAATCATGAGGTAGGAAAGTAA 456 0.4539 MFPTLGGFSATDPSMSSDHNNRAVVGEVDFFNTSSSSSVKNQTCTHGSLSEFNLHVNTGLQLLTANSKSDQSTVDDGVSSDTEDKRPKTTQLVQVQEELQRVNSENQKLKETLNHMRSSYMNLQMQVAALMQHQQKQQVSETTTENHEVGK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3676 151 MobiDBLite consensus disorder prediction 132 151 - -
Amo01g3676 151 PANTHER WRKY TRANSCRIPTION FACTOR 6 10 143 - -
Amo01g3676 151 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 10 143 IPR044810 GO:0003700
Amo01g3676 151 MobiDBLite consensus disorder prediction 1 20 - -
Amo01g3676 151 MobiDBLite consensus disorder prediction 67 89 - -
Amo01g3676 151 Coils Coil 92 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3676 Amo-Chr1 109783907 109784719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3676 2 141 WRKY Transcription Factor Family AT4G22070 39.241 5.49e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3676 - - gmx:100127382 142.895