Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3675 ATGCGAAAAGCTCGTGTCTCTGTCCGCGCCCGATCAGAAGCCCCTATGATCAGCGACGGGTGCCAATGGCGAAAATATGGACAAAAGATGGCTAAGGGAAACCCTTGTCCTCGAGCATATTACAGATGCACCATGGCAGTTGGTTGCCCAGTTCGGAAACAAGTTCAACGTTGTGCGGAGGATAGAACAATATTGATAACGACATACGAAGGGACGCACAACCACCCACTGCCGCCTGCTGCGATGGCGATGGCGTCCACAACGGCGGCGGCGGCTAGCATGCTTCTCTCTGGATCAATGTCAAGCGCTGACGGAATAATGAACTCGAGCATGATGGCAAGAGCGATTCTTCCGTCTTCAAGCATGGCAACGCTATCAGCATCAGCACCATTCCCAACCGTCACACTCGACCTCACGCACCAACCGAACGCGTTGCCTTTGCAGTATCACCAACGGCAGCAACAACAACAACAACAACATCCTCACGCGCAATTGCCGCAAGTGATTGCACAAGCGCTCTATAACCAATCCAAATTCTCTGGCCTTCAATTGTCTCAAGATGTTGGTTCTCCCAAGCTTCAAGGCTACCGTCGTTGCACCCTAACCAAAATAATCCCTTGCTCGCCGACAAGGTCAACGCCATCACCAACGATCCTAACTTCACGGCGGTCGTCGCAGCCGCCATTTCCTCCATCATCGGTGGGGCTCATCAAAATAACAACGCCAACAACTCCGACGCAAATCCCAATATCATCAACAGTGCTACAGTCGGCAGCTTTTCAGGAAATTAGAGTATTAAATTTCTTTCTACATACCTTTTCAAATTTTTTGGTCAGACGTTTTATTTCTTTTTTTTTTTTTTGGTTTAAATGTTTTACGTGGGAAAGGGAAAATGAATTAATTAGTGTTCATAGACTTTGTTGTCCACGTTATGGTGGTAGGGTTTAG 948 0.48 MRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGTHNHPLPPAAMAMASTTAAAASMLLSGSMSSADGIMNSSMMARAILPSSSMATLSASAPFPTVTLDLTHQPNALPLQYHQRQQQQQQQHPHAQLPQVIAQALYNQSKFSGLQLSQDVGSPKLQGYRRCTLTKIIPCSPTRSTPSPTILTSRRSSQPPFPPSSVGLIKITTPTTPTQIPISSTVLQSAAFQEIRVLNFFLHTFSNFLVRRFISFFFFWFKCFTWERENELISVHRLCCPRYGGRV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3675 315 ProSiteProfiles WRKY domain profile. 12 78 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo01g3675 315 PANTHER WRKY TRANSCRIPTION FACTOR 6 1 189 - -
Amo01g3675 315 SUPERFAMILY WRKY DNA-binding domain 10 78 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo01g3675 315 Gene3D WRKY domain 2 79 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo01g3675 315 MobiDBLite consensus disorder prediction 211 232 - -
Amo01g3675 315 Pfam WRKY DNA -binding domain 19 76 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo01g3675 315 SMART WRKY_cls 17 77 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo01g3675 315 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 189 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3675 Amo-Chr1 109782307 109783621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3675 1 184 WRKY Transcription Factor Family AT4G04450 73.333 6.87e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo01g3675 WRKY 2.5e-24 CL0274