Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3668 ATGAAGAACAAGCTGATCCCAGAGCTACAAGCCAAAATTTTCTCCACACTCAACTGTCCTCAAATTGTGGCCTATAAAGACTGTGATGTCATGCTAGAGAACGGTAAGTCCTTTTACAACATCTTCATGGAGTACGCTCCTCAAAATACCATCGTTAACGCAGTTAGAAGCCACACAGCTGGCTTACCTGAGGCTGTAGTGGCTCATTTCACGCACCAAATATTGGATTTACATACCTTCACTCTCAAGAAATAG 255 0.4275 MKNKLIPELQAKIFSTLNCPQIVAYKDCDVMLENGKSFYNIFMEYAPQNTIVNAVRSHTAGLPEAVVAHFTHQILDLHTFTLKK* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3668 84 Gene3D Transferase(Phosphotransferase) domain 1 2 80 - -
Amo01g3668 84 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 11 75 - -
Amo01g3668 84 SUPERFAMILY Protein kinase-like (PK-like) 11 75 IPR011009 -
Amo01g3668 84 PANTHER MAP KINASE KINASE KINASE 11 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3668 Amo-Chr1 109733333 109733824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3668 10 75 MAP Kinase Kinase Kinase AT1G05100 36.620 2.65e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3668 K20716 - lja:Lj6g3v1826350.1 83.9593