Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3666 ATGCTTTTTTTGCAGAGTGTGACAAAGCATGCTTACAAGCTGAAACAAACCGGGGATTCAAAGATTATCAGCAAGGAAGGTGGACTGCTTTTGAAAGACAACTTTGAGGGAGGGGCTACATGGGCGTACGAGGTTGGCTCACAATCAATGGTTTGCCCTATTATAGTTGAGGATCTGAACCATCCTCGTCAGATGCTAGTGGAGGTAGTTTGCAATGCTTTACCAAGTTCTTTTGCATATTCCTTTATCACCTCTCTCATCACTTTTCTTGGTTATTCCAATAGATGCTTTGCGAGGAACGAGGTTTCTTTCTGGAAATAG 321 0.4268 MLFLQSVTKHAYKLKQTGDSKIISKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEVVCNALPSSFAYSFITSLITFLGYSNRCFARNEVSFWK* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3666 106 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 72 IPR043561 GO:0003700|GO:0006355
Amo01g3666 106 PANTHER TRANSCRIPTION FACTOR LHW 1 72 IPR033260 GO:0003700|GO:0005634|GO:0006355|GO:0048364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3666 Amo-Chr1 109693488 109694490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3666 1 71 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 60.563 1.96e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3666 - - sly:101248073 135.961