Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3644 ATGGTGCTTTACAGGTCAGTTGTTTGGTCAAGAAAGGTGAATCTCACATTCACTCTAACCCAATTTTGGTTTACATTTCAAGCTGGGTTTTCTGGCCAGAGATTCTATGACGATTGGTTTCAGTCATCATATAATGTCATCTTCACAGCACTGCCTGTGATCATTGTTGGACTATTTGACAAGGATGTCAGCGCTTCTCTGTCCAAGAAGTATCCTGAACTATACATGGAGGGAACAAGAAATGAGTTTTTAAGTGGAGAGTTGTGGCTATATGGCCTTTTTTCTCTGTTCATATCTTGTCTATGCATGCTATTTGTGGGAGGTATCATTCCTCCATTGGGGATACATGACTAG 354 0.4068 MVLYRSVVWSRKVNLTFTLTQFWFTFQAGFSGQRFYDDWFQSSYNVIFTALPVIIVGLFDKDVSASLSKKYPELYMEGTRNEFLSGELWLYGLFSLFISCLCMLFVGGIIPPLGIHD* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3644 117 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 106 - -
Amo01g3644 117 Pfam Phospholipid-translocating P-type ATPase C-terminal 14 106 IPR032630 -
Amo01g3644 117 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 106 - -
Amo01g3644 117 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 109 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3644 Amo-Chr1 109478462 109479301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3644 14 106 Primary Pumps ATPases AT1G59820 67.021 2.29e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3644 K14802 - gmx:100815547 134.806