Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3631 ATGAAAATGAAGTCCCTCTTATATCCGACCCTGTTGTCATTGCTGCGTTGGCACGTGGCGGTGGTATCAGCTGCAATGCTGAACATGGCTAGCGATGAATCGGCCTTGGTTGCCATGAGGGACCATTTTAACTCCTTGGATCCCAACAATGTGCTCGCAAGCAACTGGTCTAGTAGTACCTCAGTTTGCAACTGGATTGGCGTCACATGCGGCTCTTCCCACCGCAGAGTAACTGCCTTGAATCTCGCTTACATGGCTCTTGATGCCACCATCCCTCCGCATCTTGGAAACCTGTCATTCCTTTCTCTCTTGCTTCTTCCCAACAATAGCTTCCATGGTACTCTACCTGCTGATCTAGCTGGATTACGCAGACTGACGATCATCAACTTCAGATTCAACAAATTCACAGGAAGCATCCCGTCCTGGTTTGAATTTCTACCCAAACTAGAATACCTGTTACTGAGAGGGAACAGTTTCTCTGGCACAGTCCCACATTTTCTGTTCAACATGACTTCCCTGCAATCGCTTGAACTTTCTGAAAACAAGTTTTGGGGTCCCTTACCTTCCAACATTTTCTTGTCTCATTCTTTGCAATATGTGTATCTTACTCACAAACAAATTTCAGGAGCTATCCCTTCAGCTATCATCAACAGTTCGTTACTGCAGTTTATTGTCCTCGACTACAACAACCTATCCGGACAACTGCCGGAGCTCATCTTCCACCATCTTCCACACTTGAAAGGGCTTTACGTGTATAGTAATGCCTTATCCGGCGAACTTCCACGCAGTTTGTTTGATTGCAAGCAACTGCAATTTTTATCCTTATCCTACAACACCTTCGGTGGAAACATACCATCTGCCATGGGGAATTTAACAAGCCTCAAAGAGATCTATCTTGGCCATAACAATTTTAGAGGTGCAATACCAAATGAGATTGGTAATCTACGTAGTTTAGAGATTATGAATCTTCCTTTCGCCAATGTGAGTGGCTACATTCCGCCATCAATATTTAATATTTCTACCCTACAAGAAATTGATGTTACTAGAAATCATTTATCAGGCAGCCTCCCAGCAAGCCTAGGCTCCATGCTTCCAAAACTTGTTAGGCTGTACATGGGGATTAATTATCTCAGTGGAAGAATCCCAAGCTCCTTGTACAATGCCACTATGCTTAATACCATAGATTTGGCTTACAATTCATTTTCTGGATACATTCCAGACATTTTTGGCAGCTTAAGAAGTCTCCAGCTGCTCAATCTTGGTGCAAATAATTTCACAAGTGATTCATCCGATTCAGAGCTAAGCATTATAAATTCTTTGACAAATTGTAGATTTCTCAAAAACTTGATATTTTCTGAAAATCCATTGGATTCTATTCTTCCAATATCGGTAGGAAACCTTTCTACTTCTCTGGTTGACTTGAATCTTAAGAGTTGTTCAATGAGAGGCACCATTCCAGCAAGTATTGGCAACTTGAGCAGCTTGATAAACCTTGACCTTGGTGATAATAATTTTGTTGGAACCTTTCCTACTAGCATAGGGAAATTAATAAAGATACAAGGCCTCTTTTTAGATGACAACCAATTGGAAGGATTTGTTCCGAATCAATTGTGTCAACTAACGAGCTTGTATTCATTTACCGTTAAAAGCAACAAGTTATCTGGCCCTATACCTTCTTGCTTAAGCAATCTTTCCTCATTAAGATGGCTTCGGCTTTCTTCAAATAAATTCAACTCAATACCTTCCACCTTGTGGGGGCTGTCCGATTTATTGCTTTTAGACTTATCTTCCAATAATTTAAGTGGATATCTCCCATTAGATAGTGGAAATCTAAAAGCCATAAGTTGGATTTATTTATCAGGAAATCAATTTTCAGGTAGCATCCCAAGAAGCCTCAGCAATCTTATGAATTTGGTTCTTCTTACCTTAGCAAGAAACAAATTTGAAGGGCCCATCCCAGAATCATTTGGTCGTATGGTAAGTTTGGAACAACTTGACTTATCAGAAAATAACTTGTCTGGTGTCATTCCTAAAACATTGGAGGCACTTGTGTATCTGAAATATTTCAATGTTTCTCACAATAAGTTAAAAGGAAAAATCCCGGATGGGGGACCTTTTGCAAACTTCTCAGCTCAGTCGTTCATGGGGAATAAAGGATTATGTGGTGCTCCACGTTTCCATTTTTCGGAATGTAAAATTGAAAAATCCCGAAAATGGAATGCACATATTGTGTTGACATATATTTTATCTGCAGCAATAGTTGCCACCCTTCTTGTGGCATTCCTTTGCATCCTAAAATTCCGGAAGCACAAGGTGGTCAACAATTCAGAGGTGGATCAATCGGGAGCAAGATGGAGAAGAATATCATACTATGAAATTCAGCAAGCAAAGATAGGGAGTTTTGGAAGAGTGTATAAAGGAGAACTCTCAGATGGGACGAACGTTGCAGTGAAAGTGTTTAATCTGGGACTAGAAGGAGCATTCAGGAGTTTCGATGCTGAATGTGAGATATTGCGCAGTGTCCGCCATCGAAACTTAACCAAAATCATTAGCAGCTGCAGCAACATGGACTTCAAGGCATTGATCCTAAGCTACATGCCTAATGGGAGTTTAGAGAGGTGGCTACACTCGGAACACCATGGCTTAAGTATGATCCAGAGGTTAAACATAATGATAGATGTTGCAGAAGCAGTGGATTACCTGCATAATGGTGGTTCTGTACAAATTATACACTGTGATTTGAAACCCAGCAACATATTACTAGATGAAGACATGGTTGCCCACGTGACTGATTTTGGCATTGCAAAATTGCTGAGTGGGGATGACTCCATCACTCAAACCATGAATCTAGCCACAATAGGCTATATGGCCCCTGAATATGGACTTGAGGGAAGAGTGTCTAGGCAAGGTGATGTGTATAGCTATGGAATTTTACTTATGGAGACCTTCACACAGAAAAAACCCACTGATGAAATGTTTGTGGGAGAGTTTAGCATCAAAGAGTGGGTGAAAATGTCATGCCTGATTTCACTACTTGATATCATTGATGCAAAATTATTGGTGGAAGAAGGAGAAACAGATACTAAACAGGACTGCTTGTTGTCTATAATGACTTTAGCTCTGAATTGCTCAGCTGAGTCTCCGGGTGAAAGGACAAGAATGAAAGACGCTATGAATGCTCTTAAAAAGATTAAAAGATTACTCTTGAACTAA 3213 0.4068 MKMKSLLYPTLLSLLRWHVAVVSAAMLNMASDESALVAMRDHFNSLDPNNVLASNWSSSTSVCNWIGVTCGSSHRRVTALNLAYMALDATIPPHLGNLSFLSLLLLPNNSFHGTLPADLAGLRRLTIINFRFNKFTGSIPSWFEFLPKLEYLLLRGNSFSGTVPHFLFNMTSLQSLELSENKFWGPLPSNIFLSHSLQYVYLTHKQISGAIPSAIINSSLLQFIVLDYNNLSGQLPELIFHHLPHLKGLYVYSNALSGELPRSLFDCKQLQFLSLSYNTFGGNIPSAMGNLTSLKEIYLGHNNFRGAIPNEIGNLRSLEIMNLPFANVSGYIPPSIFNISTLQEIDVTRNHLSGSLPASLGSMLPKLVRLYMGINYLSGRIPSSLYNATMLNTIDLAYNSFSGYIPDIFGSLRSLQLLNLGANNFTSDSSDSELSIINSLTNCRFLKNLIFSENPLDSILPISVGNLSTSLVDLNLKSCSMRGTIPASIGNLSSLINLDLGDNNFVGTFPTSIGKLIKIQGLFLDDNQLEGFVPNQLCQLTSLYSFTVKSNKLSGPIPSCLSNLSSLRWLRLSSNKFNSIPSTLWGLSDLLLLDLSSNNLSGYLPLDSGNLKAISWIYLSGNQFSGSIPRSLSNLMNLVLLTLARNKFEGPIPESFGRMVSLEQLDLSENNLSGVIPKTLEALVYLKYFNVSHNKLKGKIPDGGPFANFSAQSFMGNKGLCGAPRFHFSECKIEKSRKWNAHIVLTYILSAAIVATLLVAFLCILKFRKHKVVNNSEVDQSGARWRRISYYEIQQAKIGSFGRVYKGELSDGTNVAVKVFNLGLEGAFRSFDAECEILRSVRHRNLTKIISSCSNMDFKALILSYMPNGSLERWLHSEHHGLSMIQRLNIMIDVAEAVDYLHNGGSVQIIHCDLKPSNILLDEDMVAHVTDFGIAKLLSGDDSITQTMNLATIGYMAPEYGLEGRVSRQGDVYSYGILLMETFTQKKPTDEMFVGEFSIKEWVKMSCLISLLDIIDAKLLVEEGETDTKQDCLLSIMTLALNCSAESPGERTRMKDAMNALKKIKRLLLN* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3631 1070 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 6 146 - -
Amo01g3631 1070 Gene3D Ribonuclease Inhibitor 194 431 IPR032675 -
Amo01g3631 1070 Gene3D Ribonuclease Inhibitor 432 740 IPR032675 -
Amo01g3631 1070 SMART serkin_6 790 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3631 1070 Pfam Protein kinase domain 798 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3631 1070 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 266 1065 - -
Amo01g3631 1070 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 148 285 - -
Amo01g3631 1070 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 148 285 - -
Amo01g3631 1070 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 146 - -
Amo01g3631 1070 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 266 1065 - -
Amo01g3631 1070 SUPERFAMILY RNI-like 80 377 - -
Amo01g3631 1070 Pfam Leucine rich repeat 542 600 IPR001611 GO:0005515
Amo01g3631 1070 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Amo01g3631 1070 Pfam Leucine rich repeat 637 696 IPR001611 GO:0005515
Amo01g3631 1070 SUPERFAMILY Protein kinase-like (PK-like) 790 1061 IPR011009 -
Amo01g3631 1070 SMART LRR_typ_2 412 435 IPR003591 -
Amo01g3631 1070 SMART LRR_typ_2 243 267 IPR003591 -
Amo01g3631 1070 SMART LRR_typ_2 516 540 IPR003591 -
Amo01g3631 1070 SMART LRR_typ_2 170 194 IPR003591 -
Amo01g3631 1070 SMART LRR_typ_2 364 388 IPR003591 -
Amo01g3631 1070 SMART LRR_typ_2 291 315 IPR003591 -
Amo01g3631 1070 SMART LRR_typ_2 564 587 IPR003591 -
Amo01g3631 1070 SMART LRR_typ_2 659 682 IPR003591 -
Amo01g3631 1070 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Amo01g3631 1070 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Amo01g3631 1070 Gene3D Phosphorylase Kinase; domain 1 798 866 - -
Amo01g3631 1070 ProSitePatterns Serine/Threonine protein kinases active-site signature. 909 921 IPR008271 GO:0004672|GO:0006468
Amo01g3631 1070 SUPERFAMILY RNI-like 344 701 - -
Amo01g3631 1070 Gene3D Transferase(Phosphotransferase) domain 1 867 1068 - -
Amo01g3631 1070 ProSiteProfiles Protein kinase domain profile. 790 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3631 Amo-Chr1 109221853 109225296 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3631 268 701 Receptor kinase-like Gene Family AT3G47570 33.409 2.95e-49 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo01g3631 Pkinase 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3631 - K13420 aip:107613554 2024.21