Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3610 ATGATGATGATGATGATGAGTGTTAATAACTCGGTGTCATGTGGATGCAAGCCCCTACTCATGACCATGGAGTCCCTCTTCCACCACCGCATCACCACCAAGGAGAAGGTTGTGGTGGTCATTGGCGCCACCGGCACCGGCAAGTCCAAGCTAGCCATTGACATAGCCACTCACTTCAAACCGGCGGAGATTGTCAACTCCGACAAAATTCAAGTCTTCAAAGGCCTCAACATCACCACTAACAAGGTCACAGAGGAAGAGTCTCGTGGGGTCCCACACCACCTTCTTGGTTTCGTTGACGATGACGACTTCACAGCCACACAATTCTCTCACGAAGCAACCAGAGCCGTTGATTCAATCGTGCAGCGAAACGCTCTTCCCATCATTGCCGGTGGTTCTAACTCCTTCATTGACCACTTGGTCAACCACCATGACCACTTTCGTTTAAGGTACGACTGCTGCTTCCTCTGGGTCGACGTTTCCCTCCCCGTCCTCCATTCCTCTTTGGAACGCCGCGTTGACAAAATGATTCAGGCCGGTCAAGTCAACGAAGTTCGCGATTTCTTTGACCCTTCCGGAGACTACTCCAGAGGGATTCGGAGGGCCATTGGAGTCCCCGAGTTTCACCAATTTCTTCAAGCCGAGTCCATGGAAGCAGACCAGGAAACCAAGAACAGGCTTCTAGAAGACGCCATTGCCACCATCAAGCTCAACAACTGCAAGCTCGCCAACCGCCAGCTACACAAGATTCAGCGCCTCCACGCCGTGTGGAAGAGAAACATGCACCGCCTCGACGCCACTCAGGCTTTTCTTAACACACAAGAAGCCGCTTGGGAGGATCACGTGGTGGCTAAAGCTATAAGGATCGTGCAGAGGTTCTTGTACGACGAAACTCATCAACATGTTGTTCCGCCGCTTGTGTCCTCTCCGGCTTCGCCGCCAGCAGCCGCCATGGCCGCGGTAACACATTAG 972 0.5288 MMMMMMSVNNSVSCGCKPLLMTMESLFHHRITTKEKVVVVIGATGTGKSKLAIDIATHFKPAEIVNSDKIQVFKGLNITTNKVTEEESRGVPHHLLGFVDDDDFTATQFSHEATRAVDSIVQRNALPIIAGGSNSFIDHLVNHHDHFRLRYDCCFLWVDVSLPVLHSSLERRVDKMIQAGQVNEVRDFFDPSGDYSRGIRRAIGVPEFHQFLQAESMEADQETKNRLLEDAIATIKLNNCKLANRQLHKIQRLHAVWKRNMHRLDATQAFLNTQEAAWEDHVVAKAIRIVQRFLYDETHQHVVPPLVSSPASPPAAAMAAVTH* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3610 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 301 IPR039657 -
Amo01g3610 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 150 IPR027417 -
Amo01g3610 323 Pfam IPP transferase 71 144 - -
Amo01g3610 323 Pfam IPP transferase 148 248 - -
Amo01g3610 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 261 - -
Amo01g3610 323 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 301 - -
Amo01g3610 323 Gene3D - 34 294 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3610 Amo-Chr1 108991598 108993186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3610 150 304 C2H2 Transcription Factor Family AT2G27760 34.807 6.45e-24 99.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3610 01 108991598 108993186 Amo14g0094 14 1093959 1095641 PCT
Amo14g0094 14 1093959 1095641 Amo01g3610 01 108991598 108993186 PCT