Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3537 CTGCATTCTCAGATTGACATTCTCACTGAAGAAAGAAGAACAATAATCATTCGATACTTTGGAACTGATTCCATCGTAGAGCACGGACGTTATTTTTACAATATTCTATTGGAGTATGCTCTTTACCGTTCTTTGGATGACTTGATCCGCAAAAAACCTCTCTCGGAGACCGACGTGAGTGTCTATGCACGCATGATTGTTAAAGGGCTTTCGCATATTCATCTTAATGGAATCGTCCACTGTGACCTCAAGCCAGAGAACATTCTTCTGTTTCCTTCATTGGACAAAGAGAGTGCAAACTATCAATTAAAAATTGTGGATTTCGGATTATTTAAGACCAAAGAGGAGGAAGCATATGTTGAGGCATTTTCTGGTCACATTAATGCTCCGATGGATATATGGACACTTAGATGCATAGAGATTGAAATGCTGATTAGATTGCTTGCATGGAGTGAGTTTTTTTATCTTGAACTATCACCAAAGAAGTCGAAAGGAATCAGTTTTTTCTATTATGATTTTCTAGAAAAGTGCTTTATGAAAGATCCTAGCAAGAGGTGGACTGCTGACATGTTTCTTGATTATCCTTTCCTTTATATCAGAATTTTTTCATCCATATTATTTTGCAACTTGGCTATGATTGATTAA 645 0.3674 LHSQIDILTEERRTIIIRYFGTDSIVEHGRYFYNILLEYALYRSLDDLIRKKPLSETDVSVYARMIVKGLSHIHLNGIVHCDLKPENILLFPSLDKESANYQLKIVDFGLFKTKEEEAYVEAFSGHINAPMDIWTLRCIEIEMLIRLLAWSEFFYLELSPKKSKGISFFYYDFLEKCFMKDPSKRWTADMFLDYPFLYIRIFSSILFCNLAMID* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3537 214 Pfam Protein kinase domain 7 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3537 214 Gene3D Transferase(Phosphotransferase) domain 1 1 207 - -
Amo01g3537 214 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 6 200 - -
Amo01g3537 214 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 6 200 - -
Amo01g3537 214 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3537 214 SUPERFAMILY Protein kinase-like (PK-like) 5 198 IPR011009 -
Amo01g3537 214 SMART serkin_6 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3537 214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3537 Amo-Chr1 107999923 108000753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3537 16 199 MAP Kinase Kinase Kinase AT4G36950 37.264 5.02e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo01g3537 Pkinase 8.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3537 - - aip:107647747 261.922