Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3461 ATGTCAAAACTTGAGAAACAAGAAGATGATGCCTTTATGTTTGCGCAAATGGCATGTTCAGTTGTGGTTCCAATGGCTGTGAGGACCACAATAGAGCTTGGTGTATTTGACATTATAGCAAAAGAAGGCGAAGGTGCAAAGCTCTCAGCAAAAGACATTGCGGATCGCATTGGAAGCAACAACCCTGAAGCAGCATCAATATCCAGAAAGCTCTAA 216 0.4259 MSKLEKQEDDAFMFAQMACSVVVPMAVRTTIELGVFDIIAKEGEGAKLSAKDIADRIGSNNPEAASISRKL* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3461 71 SUPERFAMILY "Winged helix" DNA-binding domain 8 66 IPR036390 -
Amo01g3461 71 Gene3D - 1 71 IPR036388 -
Amo01g3461 71 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 5 68 - -
Amo01g3461 71 Pfam Dimerisation domain 25 66 IPR012967 GO:0046983
Amo01g3461 71 PANTHER O-METHYLTRANSFERASE 5 68 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3461 Amo-Chr1 107193979 107194256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3461 1 64 Monolignol Biosynthesis Gene Families AT5G54160 35.385 1.41e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3461 K13066 - ahf:112764389 120.553