Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3433 ATGGTGGATTCAACTGGAAAAGGATCGGACTCCGATGATGCAAGCCCTAACTCCGCCGCCGCAGGTAAAAGTCCAACAACCGAGCAGAAGAAGACGTGCGCCGACTGCGGTACCTCCAAGACTCCTCTATGGAGAGGTGGCCCCGCCGGCCCCAAGGTAACGCCGCCACCTACTCCTACTGCCTCACCTTTCGCGATCTACCAGATCAGCTCACGGAAGCTCTTGATCTTACGTTTCTTACATTTGAATGTGATGTTTTTTCAGTCTCTATGCAATGCCTGCGGGATCAGGAGCCGCAAGAAGAAGAGAGCCATACTCGGAATCGCAAGAGGAACCACCACCACCGACGATGTTAAAAAGGGGAAAAGAAGCAACACCGTCGCCAATAGTAATAATAACAAGTTTGGGGATAGCTTTAGTTTCAAGAAGAGGTGGATCACAATGGCGAGGCAGCGATCGAATCCTGCGCACACCCACAGGAACAAGTTGGGAGAGGAAGAACAAGCTGCTTTCCTGCTCATGTCTCTCTCTTATGGATCCGTTTATGCCTAA 552 0.5109 MVDSTGKGSDSDDASPNSAAAGKSPTTEQKKTCADCGTSKTPLWRGGPAGPKVTPPPTPTASPFAIYQISSRKLLILRFLHLNVMFFQSLCNACGIRSRKKKRAILGIARGTTTTDDVKKGKRSNTVANSNNNKFGDSFSFKKRWITMARQRSNPAHTHRNKLGEEEQAAFLLMSLSYGSVYA* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3433 183 Gene3D - 27 134 IPR013088 GO:0006355|GO:0008270
Amo01g3433 183 ProSiteProfiles GATA-type zinc finger domain profile. 27 50 IPR000679 GO:0006355|GO:0043565
Amo01g3433 183 MobiDBLite consensus disorder prediction 1 36 - -
Amo01g3433 183 PANTHER OS01G0976800 PROTEIN 1 183 - -
Amo01g3433 183 MobiDBLite consensus disorder prediction 1 58 - -
Amo01g3433 183 Pfam GATA zinc finger 33 52 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3433 Amo-Chr1 106904901 106906165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3433 24 183 C2C2-Gata Transcription Factor Family AT5G49300 42.500 1.06e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Amo01g3433 GATA 9.2e-07 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3433 - - aprc:113847917 142.51