Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3429 ATGGGAGTTGAAAAAGAAGGGACAAAAAGTGAAGGTGGGTATGTTGGTGGTCTTTTGCGGTTATTCGACTGGACCTCGAAATCACGGAAGAAGTTATTTGCAACCAAGTCAGATTTGCCAGGATCTTTGAAACAGAGAAGAAAAATTGATGGCAACTTGTCAATGATGCAGCCCTATCTGGCTGATGAAGATGAGATTGGAGTAGGAGCAAGCATTAGAAGTAGTGATCACAGTTATGCTTCATCCGTTACAGATGACGACATGTGCGGAACAAGGGCACCTAGTGTGGTTGCTAGGCTTATGGGATTGGATTCCTTGCCCTCTTCCAGTTTTCATGATCCATATTCTTCCCCATATTTTGATAGCCGATCTCTTCAAGATGTCCAGTACTGGAGGACTAATCTCAATCATCAGCATGGCCATCAGAACCTGTATTCCGGGAAGTTGGTTGAAAAGGTTGAGGGCTCTTCTAGAAACTTCATTGAGCCAAAGCCTCAGAACAACCTTAGCAGACCAATTGAGAAGTTTCAAAGTGAGGTAATGCCTCCCAAAGCGGCTAAAACAATTCCTGTCACACACCATAAACTTTTGTCCCCTATTAAGAGTCCTGGCTTTATTCCAACAAATAATGCTGCTTATATAATGGAGGCTGCTGCAAGAATTATTGAACCTAGCCCCCAAGCTACTACAAAGGCTAGAGCACACCTTGCATCATCATCATCAGTATCATTGAGAGTAAGAGATCTTAAAGAAAAAGCAGAGGCTTCACAGAAAGGTCCTCTAGTTGGGTCAGCTTCAATGCCCCCTAGAATTAGAGATCTCAAAGAAAAAGGGGAAGTTTCTCATAGAACTAGCAGGATTTCTGAACCTTCTCAGAGGTCAGTTGAATCTAATTCTGTCAAGTATCTAAAGAGACAATCTTTGAACAAAAGCTGGAATGGGTCCGTGGATGCTTCCACCCGATCTTCTACCGAAGCAAAAGAAGATTCGTCTGTGAAGAATGCAGGGAAGTCTATTTCCCTTGCCATCCAAGCAAAAGTGAATGTTCAAAGAAGAGAAGGCTTGAACTCAAGTGGTGGAAGAAGTTTGGTGGATCAGAAAGAAGATTCTGATGCTAAAACTCACCAGCCTCTCAGGGCAAATGTTCAAAAAGGTTTGCATAAGAAGCCCTCTGGTCAGAACGCTTCTGGTGTTCTCAAGCAGAATAATCTGAAACAAAACCATTCAATTGAGAAAGATAAACAACCATCAAAGCAAATAGTTTCAAATTCACACCGTAGAAAATCTCTGATGGGGGACTCCGGGTGTCATAGAAGCTCTAGTAGTAAAACACCTGCAAAATCTAAAGTTGGTTCCAAAAAATCGGCCACACAGCTGACAGATAGTGAAAAGGAAGTTTTGTATACCCACACAAACAATTTCCCAAGAAAGAAGAGGTCCACAGATAGGGACTGGAATGATAGGGTTGTTGATAATTTGTTTATTGATAAAACTCAGAGGCCTGCTCAGTCTAGTCTAGTAAGTAATAAGCGCCATAGTGATGATGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACCTTCACCACGCCGTTGGCGAGAAACAATTCCAGTTTTGAGACATCTGGAAAATCTGGCATGAAAACTGGTGTACTTCCCTTTGACCATCACATCAAAAGAGTGCTGCTTGACACAGACAATGCAAGGTCTCCCGTTGGATACAATGTGATTGGTGGTGATGCATTAGGCATTCTTTTGGAACAGAAGTTGAGGGAATTGACAAATGGACTTGAGTACTCTTGTGATGACTCTTCTAAAGTGAGGCCATCATCTAGTACAGGACCACAATCAAAAGATGTGGTGACCACGCCCGATTCAGTTAACTTCGTTCCACAGTTGCAACTGAAGAGGGACCAGGACCTGCTTTTAGCTGATAAGTTATGCGGAAGCCTTGATTCTGCAGTTTCCTTCACAGGTCTTCCTGAATTATCATCCAAACATAGACTATGGGGTGATAAGATGGAAGAGTGCAAGAGCAATCTTGTAGAACCACAGTCATTCAATTGTCGATTGCCAAGTCCAATCTCTGTTCTTGAGCCTTCATTTTCAGCAGAAACCTTTGAATCTTCATTCAGCACCGATGCTACTAGCACAGAAGGTAGCAAGTTGAGCTTATCTGCTCAAGCACAGGAAGTTCATGGTTTGAATTTCTCAGGGAAGTTCTATTCTGCAGAAGCTGATACAGAGTTGTGTGATTCAGCTTGTTCAACATCAACCAGGACCATGATGGTAAATAAGGAGCACACAAGCACAAGTGCATTATCAACCACATGGGAGTTGGATTATGTAAAAGAGATATTATGCAATGTTGAACAAATGTACATGGACTTCGCTTCCGGCCGTGCTCACAAAATTGTGAACCCTCATCTATTCAACCAGTTGGAAAGCCAGAGAGAAGCAGGGTATGAGAGTGATGGTGGAGAATGTAGGATAAGGAGGAAAGTGATATTTGATTGTGTGAGTGAATATTTGGACTTAAGATGCAGGCGTTGTGTTAATGGTGGATATGAAATGTGGGCCAAAGGGACTGAAATGGTGAGAAGAAATGAATGGTTGGCAAAGGAAGTGTACAAGGAAATTTCAAGCTGGAGAGGGATGGGAGATTCCATGGTGGATGAGCTTGTGGACAAGGATATGAGCCAACAATATGGAAGATGGCTAGATTTTGAACTTGATGCATTTGAACTTGGTGCAGAGGTTGAGGATCAGATACTGAATTCCTTGCTTGATGATGTTGTTGCTGATATCTTGCAATTATAA 2823 0.4219 MGVEKEGTKSEGGYVGGLLRLFDWTSKSRKKLFATKSDLPGSLKQRRKIDGNLSMMQPYLADEDEIGVGASIRSSDHSYASSVTDDDMCGTRAPSVVARLMGLDSLPSSSFHDPYSSPYFDSRSLQDVQYWRTNLNHQHGHQNLYSGKLVEKVEGSSRNFIEPKPQNNLSRPIEKFQSEVMPPKAAKTIPVTHHKLLSPIKSPGFIPTNNAAYIMEAAARIIEPSPQATTKARAHLASSSSVSLRVRDLKEKAEASQKGPLVGSASMPPRIRDLKEKGEVSHRTSRISEPSQRSVESNSVKYLKRQSLNKSWNGSVDASTRSSTEAKEDSSVKNAGKSISLAIQAKVNVQRREGLNSSGGRSLVDQKEDSDAKTHQPLRANVQKGLHKKPSGQNASGVLKQNNLKQNHSIEKDKQPSKQIVSNSHRRKSLMGDSGCHRSSSSKTPAKSKVGSKKSATQLTDSEKEVLYTHTNNFPRKKRSTDRDWNDRVVDNLFIDKTQRPAQSSLVSNKRHSDDEVKKKDMDVVSFTFTTPLARNNSSFETSGKSGMKTGVLPFDHHIKRVLLDTDNARSPVGYNVIGGDALGILLEQKLRELTNGLEYSCDDSSKVRPSSSTGPQSKDVVTTPDSVNFVPQLQLKRDQDLLLADKLCGSLDSAVSFTGLPELSSKHRLWGDKMEECKSNLVEPQSFNCRLPSPISVLEPSFSAETFESSFSTDATSTEGSKLSLSAQAQEVHGLNFSGKFYSAEADTELCDSACSTSTRTMMVNKEHTSTSALSTTWELDYVKEILCNVEQMYMDFASGRAHKIVNPHLFNQLESQREAGYESDGGECRIRRKVIFDCVSEYLDLRCRRCVNGGYEMWAKGTEMVRRNEWLAKEVYKEISSWRGMGDSMVDELVDKDMSQQYGRWLDFELDAFELGAEVEDQILNSLLDDVVADILQL* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3429 940 MobiDBLite consensus disorder prediction 387 405 - -
Amo01g3429 940 MobiDBLite consensus disorder prediction 422 469 - -
Amo01g3429 940 PANTHER EXPRESSED PROTEIN 1 938 - -
Amo01g3429 940 MobiDBLite consensus disorder prediction 230 335 - -
Amo01g3429 940 MobiDBLite consensus disorder prediction 352 482 - -
Amo01g3429 940 MobiDBLite consensus disorder prediction 270 286 - -
Amo01g3429 940 MobiDBLite consensus disorder prediction 406 420 - -
Amo01g3429 940 Pfam Domain of unknown function (DUF4378) 780 932 IPR025486 -
Amo01g3429 940 MobiDBLite consensus disorder prediction 287 321 - -
Amo01g3429 940 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 938 - -
Amo01g3429 940 Pfam DUF761-associated sequence motif 81 111 IPR032795 -
Amo01g3429 940 MobiDBLite consensus disorder prediction 602 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3429 Amo-Chr1 106884941 106889325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3429 16 938 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.579 1.11e-94 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3429 - - gmx:102660038 1256.12