Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3408 ATGGCGTTTTGGTGGCCATTGCTTGTCTTAGCATTCGCGTACGGACTCTGCAGGTTCCTTTTCATGCTTATTCCTCCCAAGGTTCCTTCCATCGATGTTGAAGCTTCCGACGTGTTGGATGATGGAAACCAAGCGCAGGAGAATAGCTTCATATATGTTCCTCCGAGAGGAACGTCACAGCAATCTGGAAAGATAGTTCAGTGCTATGAGCCTGCGACTATGAAATATTTAGGATATGTTCCTGCATTGACGCGTGATGAGGTMAAGGATCGTGTGGCAAAAGTAAGAAAGGCTCAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGACGCACGTTTTTGCGTATACTGTTGAAATATATAATCAAACATCAARCGCTCATATGCGAAATATCTTCGCGTGATACTGGAAAGACCATGGTAGATGCCTCTTTAGGAGAAATTATGACAACTTGTGAAAAGATCAATTGGCTACTGTCAGAAGGCGAACAGTGGCTAAAGCCTGAATACCGGTCTTCTGGAAGATCAATGCTTCACAAGAGAGCAAAAGTAGAATTCCACCCCCTTGGTGTTATTGGTGCCATCGTTTCATGGAATTATCCTTTCCACAATATTTTTAATCCAATGCTGACAGCTGTTTTTTCTGGAAATGGCATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATAATCCAATCTGCCCTTGCTGCAATAGGAGCGCCTGAGGACCTTGTTGAGGTCATAACAGGATTTGCTGAAACTGGAGAAGCGTTGGTATCTTCTGTTGATAAAGTCATATTTGTTGGATCACCTGGTGYGGGGAAGATGATAATGAGAAATGCTGCTGAGACACTTATTCCAGTTACTCTAGAGCTTGGTGGCAAAGATGTATTTATTGTTTGTGATGAYGTAGATGTGGACCATGTTGCGCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGACAGAACTGTGCTGGGGCTGAGAGATTTTATGTCCACAGGGAGATTTATTCTTCTTTTGTCAGTAAAGTTACCAAAATCATAAAATCAGTTAGAGCTGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAGCTYGAGGGCCTTATCAATGATGCTTTAGACAAAGGAGCCGAGATYGTTGCTCGTGGAAGTTTTGGACATATAGGTGAAGATGCTGTTGATCAATATTTTCCCCCTACTGTGATTGTGAATGTGAACCACTCAATGAGACTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGACGAGGAGGTTGTCAAGCTCGCAAATGACTCAAAATATGGGCTTGGCTGCGCTGTTTTCTCAGGTTCTCAGGACCGTGCTAGAGATATAGCTTCACAAATACATTGTGGGGTTGCTGCCGTTAATGACTTTGCAGCAACGTACATGTGTCAGTCCCTGCCATTCGGCGGCGTAAAACATAGTGGATTTGGACGATTCGGTGGTGTAGAAGGTTTGCGAGCCTGCTGTCTTGTCAAGGCAGTTGTCGAAGATAGATGGTGGCCATTTGTCAAAACCAAGATACCTAAACCTATTCAGGTCAGTCATGAAACAAAATTTTTTCGTATTTCCAAAAAAAAAGTTATGTTCGATTAA 1692 0.4273 MAFWWPLLVLAFAYGLCRFLFMLIPPKVPSIDVEASDVLDDGNQAQENSFIYVPPRGTSQQSGKIVQCYEPATMKYLGYVPALTRDEVKDRVAKVRKAQKMWAKTSFKQRRTFLRILLKYIIKHQXLICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHKRAKVEFHPLGVIGAIVSWNYPFHNIFNPMLTAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGXGKMIMRNAAETLIPVTLELGGKDVFIVCDDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIIKSVRAGPPLAGKYDMGALCMHEHSEKLEGLINDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVKLANDSKYGLGCAVFSGSQDRARDIASQIHCGVAAVNDFAATYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQVSHETKFFRISKKKVMFD* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3408 563 SUPERFAMILY ALDH-like 60 529 IPR016161 GO:0016491
Amo01g3408 563 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Amo01g3408 563 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Amo01g3408 563 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 544 - -
Amo01g3408 563 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Amo01g3408 563 Pfam Aldehyde dehydrogenase family 60 527 IPR015590 GO:0016491
Amo01g3408 563 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 544 - -
Amo01g3408 563 CDD ALDH_F15-22 69 531 - -
Amo01g3408 563 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 525 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3408 Amo-Chr1 106688509 106694423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3408 1 545 Aldehyde Dehydrogenase Gene Family AT3G66658 80.000 0.0 952