Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3303 ATGGATGATTCAACCTCAGATTGTCAGCAGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGACGCTCGGGTGTAGATCAGAATTTTTTTGGTGTATTTTTGCGGGAAGTGTGGGTCTGAGTTGTTGTCGTTCGGGTCTTCTCTCTGTTGTTGATGACCAGTTTGTTCTGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTAGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTTTCTACAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCTGACCGAGAAGACGAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATATTGGTGCTTGGATCATTTCAAAAGTTGTGCTGGATCATTCACACCCTTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGAAACTAAGCATGTCCATTCATCGTACAATAGAGAATAACGAGAAGGCTAAGCATGCATTCATTTTTAACAAGTTTATTACCCGGAACAACTCGCTTATTCAATTCGTCAAACAATACGATAATTGGCTCAGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTCATACGGTCATACTGTGTGCAACCAAATCCTCCATTGAAGCTCAGTTTCAAGATGTGTACACTCATCAAAAGTTTAGGAAAATCCAAGCACAATTCAGAGGAAAGGCGAATTGCATCACTAGATTAACGAATTCCGCTCTAGGCTATTCAGTATACGAAGTCGGAGAACAAGTTTCCAGCTCAATATTCAACAAGTTTGTGGTTACTTACGACTCAGTAGCAGCCGAGGTAAAATACCAATGCTTATTATTCGAGTCAAGAGGGATATTGTGCCGTCACGCACTAAGCGTGTTAAGCTTTGAACGAGTAAGCCAAGTGTCACCGAGATATATACTGAAACGATGGAGTAAAAAGGTAAAGAGGCGACACACACACATCAAGAGCAGTCACGACGAGCCACTGTTGGAGCCAAGAAGAAAGAGGTTTGACCAATTGGTTTTTCGTTCGCAAAATATTTGCGAATTTGCATCCGAATCGGAGGAGCTGACTGCAATTCTGCATCGTGCGTACGATAACGTCATGGTTGAGATGGAATCATTGAAAGCCAAAAGGAAGGGCACATCTTCTTTATCTCACGAAGACGCCAACTTGGAATCCATTAACGAGCTTCAAAGCCCTCCAAAGATTCGAACAAGAGGACGTCCAAAAAATTGGCTAGGTTCAAAGTTGGACAAACAGATTGCAAATGCTACAAAGAAGAAGAAAATGAAAGCTTTAAACGAGTTAAACCTCTTTGATGCTGCATCAGTGGTGCATTCAAATTCCAGCCAATATTAA 1467 0.4158 MDDSTSDCQQNQGEVDYEFESNEVPETLGCRSEFFWCIFAGSVGLSCCRSGLLSVVDDQFVLKVGMTFTTLEDARKFYRNYAKAAGFSTRVRSTNRKGNEIKNQLITCSREGKWKSKISLTEKTNPTAGLNCPARIYIHTLKDIGAWIISKVVLDHSHPCCPSKAEMLKQHRKLSMSIHRTIENNEKAKHAFIFNKFITRNNSLIQFVKQYDNWLRSREQAERESDAADFHTVILCATKSSIEAQFQDVYTHQKFRKIQAQFRGKANCITRLTNSALGYSVYEVGEQVSSSIFNKFVVTYDSVAAEVKYQCLLFESRGILCRHALSVLSFERVSQVSPRYILKRWSKKVKRRHTHIKSSHDEPLLEPRRKRFDQLVFRSQNICEFASESEELTAILHRAYDNVMVEMESLKAKRKGTSSLSHEDANLESINELQSPPKIRTRGRPKNWLGSKLDKQIANATKKKKMKALNELNLFDAASVVHSNSSQY* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3303 488 Pfam FAR1 DNA-binding domain 76 161 IPR004330 -
Amo01g3303 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 173 IPR031052 GO:0006355
Amo01g3303 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 185 409 IPR031052 GO:0006355
Amo01g3303 488 PANTHER OS03G0843700 PROTEIN 58 173 - -
Amo01g3303 488 PANTHER OS03G0843700 PROTEIN 185 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3303 Amo-Chr1 105403575 105406524 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g3303 FAR1 7.7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3303 - - adu:110276980 516.538