Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3302 ATGAAATATTTAGGATATGTTCCTGCATTGACGCGTGATGAGGTAAAGGATCGTGTGGCAAAAGTAAGAAAGGCTCAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGACGCACGTTTTTGCGTATACTGTTGAAATATATAATCAAACATCAAGCGCTCATATGCGAAATATCTTCGCGTGATACTGGAAAGACCATGGTAGATGCCTCTTTAGGAGAAATTATGACAACTTGTGAAAAGATCAATTGGCTACTGTCAGAAGGCGAACAGTGGCTAAAGCCTGAATACCGGTCTTCTGGAAGATCAATGCTTCACAAGAGAGCAAAAGTAGAATTCCACCCCCTTGGTGTTATTGGTGCCATCGTTTCATGGAATTATCCTTTCCACAATATTTTTAATCCAATGCTGACAGCTGTTTTTTCTGGAAATGGCATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATAATCCAATCTGCCCTTGCTGCAATAGGAGCGCCTGAGGACCTTGTTGAGGTCATAACAGGATTTGCTGAAACTGGAGAAGCGTTGGTATCTTCTGTTGATAAAGTCATATTTGTTGGATCACCTGGTGCGGGGAAGATGATAATGAGAAATGCTGCTGAGACACTTATTCCAGTTACTCTAGAGCTTGGTGGCAAAGATGTATTTATTGTTTGTGATGATGTAGATGTGGACCATGTTGCGCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGACAGAACTGTGCTGGGGCTGAGAGATTTTATGTCCACAGGGAGATTTATTCTTCTTTTGTCAGTAAAGTTACCAAAATCATAAAATCAGTTAGAGCTGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAGCTTGAGGGCCTTATCAATGATGCTTTAGACAAAGGAGCCGAGATCGTTGCTCGTGGAAGTTTTGGACATATAGGTGAAGATGCTGTTGATCAATATTTTCCCCCTACTGTGATTGTGAATGTGAACCACTCAATGAGACTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGACGAGGAGGTTGTCAAGCTCGCAAATGACTCAAAATATGGGCTTGGCTGCGCTGTTTTCTCAGGTTCTCAGGACCGTGCTAGAGATATAGCTTCACAAATACATTGTGGGGTTGCTGCCGTTAATGACTTTGCAGCAACGTACATGTGTCAGTCCCTGCCATTCGGCGGCGTAAAACATAGTGGATTTGGACGATTCGGTGGTGTAGAAGGTTTGCGAGCCTGCTGTCTTGTCAAGGCAGTTGTCGAAGATAGATGGTGGCCATTTGTCAAAACCAAGATACCTAAACCTATTCAGTATCCTGTCGCAGAGAATGCATTCGAATTTCAGGAATCACTGGTGGAAGCACTTTATGGACTCAACATATGGGAACGTTTGCAAGCATTAGTAAATGTTTTGAAGATGCTTACTGAGCAGAACCCTGCCGCTGAAAGCATTAAGAAGAAAAATAACTAG 1575 0.4254 MKYLGYVPALTRDEVKDRVAKVRKAQKMWAKTSFKQRRTFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHKRAKVEFHPLGVIGAIVSWNYPFHNIFNPMLTAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGAGKMIMRNAAETLIPVTLELGGKDVFIVCDDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIIKSVRAGPPLAGKYDMGALCMHEHSEKLEGLINDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVKLANDSKYGLGCAVFSGSQDRARDIASQIHCGVAAVNDFAATYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQYPVAENAFEFQESLVEALYGLNIWERLQALVNVLKMLTEQNPAAESIKKKNN* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3302 524 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 252 263 IPR016160 GO:0016491
Amo01g3302 524 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 224 231 IPR029510 GO:0016491
Amo01g3302 524 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 452 IPR016162 GO:0016491
Amo01g3302 524 Pfam Aldehyde dehydrogenase family 3 454 IPR015590 GO:0016491
Amo01g3302 524 CDD ALDH_F15-22 1 458 - -
Amo01g3302 524 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 489 - -
Amo01g3302 524 SUPERFAMILY ALDH-like 3 456 IPR016161 GO:0016491
Amo01g3302 524 PIRSF ALDH 7 499 IPR012394 GO:0006081
Amo01g3302 524 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 232 427 IPR016163 GO:0016620
Amo01g3302 524 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3302 Amo-Chr1 105388503 105393128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3302 1 523 Aldehyde Dehydrogenase Gene Family AT3G66658 78.967 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3302 - - aprc:113848242 986.867