Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3261 ATGTTGATGAAGGCGAGTTCAACAAGTGCAAATGGTGATGGTGATGGTGATAGTGGGTGTCCATTAGGGAGTGACACATACCAATATAGTTGCCCGGAAGCAGAAGCAATAATCTTCTCATGGGTGGAACAAGCTATATCTCAAGACTCCAGAATGGCAGCCTCGTTACTTAGGCTGCATTTCCATGATTGCTTTGTCAATGCAAGACATTCTTTAGGATGTGATGCTTCGGTTCTGTTAGATGACAGAGATGATTTTGTGGGTGAGAAGAGTGCAGCTCCAAACCTGAATTCGTTAAGAGGCTTTGAAGTGATCGACGCAATCAAATCAGAGCTAGAATTAGTGTGTCCTGAAACTGTCTCTTGTGCTGATATATTGGCAACTGTTGCTCGAGATTCTGTCGTTCTGTCAGGAGGTCCAGCTTGGGAAGTGAAAATGGGAAGAAAAGATAGCATAAGTGCAAGCAAGGAAGCAGCAAATAATAACATCCCAGCTCCAAATTCAACGGTTGATGACCTCTTGACTAAGTTCCAGAATGTCGGACTTAATCTTCAAGACATGGTGGCCTTATCAGGTGCTCATACAATTGGAAAAGCGCGATGCTCGACATTTAGCAGTCGCCTACAGAGTAGCAGTGACTCATCAGATGTTAATATGCAATTCATCGAGTCGTTGCAACAGCTGTGTTCAGGAGAAGATAACACCAACAAAGTTGCACACCTTGACCTCGCTACACCAGCTACATTTGACAGCCAGTACTACGTTAATCTACTTTCTGGGGAGGGGCTACTGCCGTCAGACCAAGCCCTCGTCAATGGGAATGATCATACACGACAAATTGTGGAAACCTATGTCGAGGATCCATCTGCTTTTTTTGACGACTTCAGATATTCAATGGTGAAGATGGGAAGTTTGGGTTCGAATACTCAAATTGATGGCCAGATTCGAAGGGACTGCCGAACTATTAACTTACCTAATTAA 981 0.4393 MLMKASSTSANGDGDGDSGCPLGSDTYQYSCPEAEAIIFSWVEQAISQDSRMAASLLRLHFHDCFVNARHSLGCDASVLLDDRDDFVGEKSAAPNLNSLRGFEVIDAIKSELELVCPETVSCADILATVARDSVVLSGGPAWEVKMGRKDSISASKEAANNNIPAPNSTVDDLLTKFQNVGLNLQDMVALSGAHTIGKARCSTFSSRLQSSSDSSDVNMQFIESLQQLCSGEDNTNKVAHLDLATPATFDSQYYVNLLSGEGLLPSDQALVNGNDHTRQIVETYVEDPSAFFDDFRYSMVKMGSLGSNTQIDGQIRRDCRTINLPN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3261 326 ProSiteProfiles Plant heme peroxidase family profile. 21 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PANTHER PEROXIDASE 72-RELATED 9 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 Gene3D Peroxidase, domain 2 164 303 - -
Amo01g3261 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Amo01g3261 326 PANTHER PEROXIDASE 40 9 322 - -
Amo01g3261 326 Gene3D - 27 323 - -
Amo01g3261 326 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 Pfam Peroxidase 42 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g3261 326 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Amo01g3261 326 CDD secretory_peroxidase 27 320 IPR033905 GO:0004601|GO:0042744
Amo01g3261 326 SUPERFAMILY Heme-dependent peroxidases 22 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3261 Amo-Chr1 104765197 104766410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3261 13 323 Peroxidase AT4G16270 60.923 1.19e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3261 K00430 - gmx:100787637 488.804