Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3241 ATGGGTCAATTGAGGAAGAATGTTGCAATTATTGTTGCAATGATCATGATTGTTGTGACAAAAGCTGAAGAACACATAGTTGGAGGAGAAAGCATAGGGTGGACTAGTTATCCACCTGGTGGTGCTTCTTTCTATTCAAATTGGGCTTCAAACCATACTTTCATAGTGAATGACACCCTAGTGTTTAAATTTGAATCTGGGAGCCATTCAGTGGCAGAACTTACAAAGAATAACTACGAAAAATGCGACGAAAATGAGAAGATAGAATTCTATGTGATAGGACCAGCCAGAGTGACCCTTAACCGTGCTGGAAGGTTCTATTTTTCATGCACATTCTCAGGACATTGCAGCAGTGGCCAAAAGCTAAGTGTTGAAGTAGTCACTGGTAATTTTTCTTCTGCACCAAGAAAAGCTCCTTCTAGTTCTACTCCTCCTTCTCTTCCTCCAAGTGGCTCATCTGCTTCTGTAGCTTCTACTACCTTTTCTATTTTCATTACAACCATTACCTTCAAAACTTTGTTCCAATTTTAG 531 0.3974 MGQLRKNVAIIVAMIMIVVTKAEEHIVGGESIGWTSYPPGGASFYSNWASNHTFIVNDTLVFKFESGSHSVAELTKNNYEKCDENEKIEFYVIGPARVTLNRAGRFYFSCTFSGHCSSGQKLSVEVVTGNFSSAPRKAPSSSTPPSLPPSGSSASVASTTFSIFITTITFKTLFQF* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3241 176 MobiDBLite consensus disorder prediction 135 155 - -
Amo01g3241 176 Pfam Plastocyanin-like domain 43 120 IPR003245 GO:0009055
Amo01g3241 176 Gene3D - 22 137 IPR008972 -
Amo01g3241 176 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 9 162 - -
Amo01g3241 176 ProSiteProfiles Phytocyanin domain profile. 23 128 IPR003245 GO:0009055
Amo01g3241 176 SUPERFAMILY Cupredoxins 22 127 IPR008972 -
Amo01g3241 176 PANTHER BLUE COPPER PROTEIN 9 162 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3241 Amo-Chr1 104480341 104481373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3241 7 156 Phytocyanin Superfamily AT2G25060 36.076 8.69e-25 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3241 - - gsj:114392869 172.555