Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3182 ATGGTGAGCTTGAAAGGGGGAACAAGGCCACCATGGGTGGGGCTGGGAGCTTCCGTGTGGGTTCAGGTGGCATCGGGAAATGGTTACACTTTCCCGCTCTATTCCCATTCTTTGAAGTCAGTCATGGGCTTCAACCAGCAGCAACTCACACTCCTCGGTGTTGCCAACGACATCGGCGAGAATGTTGGTATTCTTCCTGGCCTTGCTTCCAACAACTTCCCTCCATGGCTTCTCCTCTTCATCGGTGCTCTCTTCTCCTTCATTGGCTACGGCCTTCTCTGGCTCCCCCTCAGCCACACCCTCCCTTCTCTTCCCTACGCCTTGCTATGGTTTTCCCTGGTTGTTGCAACCAACAGTTGTGCGTGGTTAACCACCGGGATTCTTGTAACCAACATGAGGAATTTCCCTATCAGCAGAGGCACGGTGGCCGGAATCCTCAAAGGTTACGGCGGCCTCAGCGCCGCCGTCTTTACTCAAATCTACGGWATAGTTCTTCACAATTCATCCTCCAATTTCCTCTTGTTCCTTGCAATTGGTATTCCTGCTGTGTGCTTCAGCATGATGTTTCTTGTTAGGCCTTGCACTCCACTTTCCACTGAAGATTCCAAAGAGAAAGGGCATTTTCTGTTCATCCAAGCTTCAAGTGTGGTMTTGGGTTTATACATTCTTGCCACAAACATATTTGGTGACATTCTCMWCTTGAGTRGTGCACTTTCCTACCTCTTGGTGGCTCTCATGATTCTACTCCTCATGGCTCCACTTGCTATCCCTATCAAGATGACACTCTGTCCCAAAACAGGATCCACCCGATCACAAACACCTAATGCCTCCTCGGAACGTTTGCCCCAAGAAGGAGCCAAAGAAGACAACACCGAGCCGCTGCTGGCGTCTTCCTCGGCCAGTGGGCTCGGAAGCTTCTACGACACGGATCCCTCGGCCGAGGTRGCAATGCTTCTGGCCGTGGGCGAGGGAGCCGTGAAGAAGAAGAGAAGGCCTAAAAGAGGGGAAGATTTTAAGTTCACAGAGGCAATAGTAAAGGCTGATTTCTGGCTACTRTTTTTCATTTACTTTGTTGGTGTTGGAACTGGGGTCACTGTAATCAACAATCTAGCACAAATTGGCATTGCACAAGGTGAGGATGATACCACTATCTTGTTGTCCCTTTTCAGCTTTTTCAACTTTGTTGGTCGCCTTGGTGGAGGAGTYCTTTCAGAACATTTTGTCAAAACGAAAACAATTCCGCGCACGGTTTGGATGACATGCACTCAGGTAATGATGATGATCCTATACATCCTGTTTGCATATGCTATCAATGGGGCCCTATACCCTGCCATTGCACTTCTTGGAATCTGCTATGGAGTGCAATTCACAGTGGTGATTCCAACTGTGTCTGAGCTTTTTGGTTTGGAGCACTTTGGGATGTTGAGCAACTTCATATTCATGGGGAATCCACTTGGTGCATTCCTCTTCTCAGCACTTCTAGCAGGTACTGTGTATGACAATGAGGCTACAAGGCAACAAAGCATGGGAATCATTCCTTCAAGTGCTTCTTGCTTGGGCCCTGATTGCTTTAAGATCACATTCCTCACACTTTCTGCTGTTTGTGCTGTTGGTGCCTTTGCTGGTACCATCTTGGCTGTAAGAATTAAGCCTGTTTACCAAATGCTTTATGCTGGTGGTTCTTTCAAGTTGCCACAAACTTCTTCTTCACTTCACTAA 1719 0.4793 MVSLKGGTRPPWVGLGASVWVQVASGNGYTFPLYSHSLKSVMGFNQQQLTLLGVANDIGENVGILPGLASNNFPPWLLLFIGALFSFIGYGLLWLPLSHTLPSLPYALLWFSLVVATNSCAWLTTGILVTNMRNFPISRGTVAGILKGYGGLSAAVFTQIYGIVLHNSSSNFLLFLAIGIPAVCFSMMFLVRPCTPLSTEDSKEKGHFLFIQASSVVLGLYILATNIFGDILXLSXALSYLLVALMILLLMAPLAIPIKMTLCPKTGSTRSQTPNASSERLPQEGAKEDNTEPLLASSSASGLGSFYDTDPSAEVAMLLAVGEGAVKKKRRPKRGEDFKFTEAIVKADFWLLFFIYFVGVGTGVTVINNLAQIGIAQGEDDTTILLSLFSFFNFVGRLGGGVLSEHFVKTKTIPRTVWMTCTQVMMMILYILFAYAINGALYPAIALLGICYGVQFTVVIPTVSELFGLEHFGMLSNFIFMGNPLGAFLFSALLAGTVYDNEATRQQSMGIIPSSASCLGPDCFKITFLTLSAVCAVGAFAGTILAVRIKPVYQMLYAGGSFKLPQTSSSLH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3182 572 SUPERFAMILY MFS general substrate transporter 203 551 IPR036259 -
Amo01g3182 572 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 570 - -
Amo01g3182 572 SUPERFAMILY MFS general substrate transporter 17 196 IPR036259 -
Amo01g3182 572 CDD MFS_Mch1p_like 10 539 - -
Amo01g3182 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 570 - -
Amo01g3182 572 Pfam Nodulin-like 11 258 IPR010658 -
Amo01g3182 572 Gene3D MFS general substrate transporter like domains 345 553 IPR036259 -
Amo01g3182 572 MobiDBLite consensus disorder prediction 267 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3182 Amo-Chr1 103741163 103743747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3182 5 568 Nodulin-like Gene Family AT1G80530 54.770 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3182 - - gmx:100787328 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3182 01 103741163 103743747 Amo13g3048 13 82749454 82753249 PCT
Amo01g3182 01 103741163 103743747 Amo03g2257 03 92595547 92599158 PCT
Amo13g3048 13 82749454 82753249 Amo01g3182 01 103741163 103743747 PCT
Amo03g2257 03 92595547 92599158 Amo01g3182 01 103741163 103743747 PCT