Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3171 ATGCGTGAAATTGAAGAAGTAGTGGCTTGTTCAGGCAAAGGAGAGAGTGGAAGCAATGGCTTCAACTTCATGAATGCTAAATGCATGTATCATTTACTGCATGTAGCATTTTTATTAGTGAAAAATAAAAACATTGTAGCAATTGAATTGGATTTGGATTTGGATGGCAATAATGGCTTCTTCTCCTCTTCATCGACTACAATTCCCAAAATGCCACTATCTTTCTTTGAAATCCGAGAAATAGAAAAGGACTATTTTGCATGCCCAATATGTTATGAACCACTCATAAGAAAAGGTCCCTCTGGCCTTAACTTATCAGCAATATACAGATCAGGTTTCAAGTGTAAAAGATGCAGAAAATCATTCTCTAGTAAAGATAAGTATCTTGATTTGACGGTTACTTCTGGATTATTGGACTACACTGAAAACCAACCATATCTCACTGAGCTTTTCAGGAGTCCATTTGTTTCATTTTTGTACGAAAGAGGTTGGCGTCAGAATTTCAATCTAGGAGGCTTTCCAGGTCCTGAAGAAGAGTTCAAAATGGCTCAAGACTACTTTCAATCTGCTAAAGGTGGCTGCATCGTCGATGTTAGCTGTGGAACTGGCTTGATTTCGCGAAAATTCGCCAAGTCTGGATCATATTCTGGAGTGGTGGCGCTGGATTTTTCTGAAAACATGCTTCGCCAGTGTTATGATTTCATCAACAAAGATGACATTCTTTTGAAAGCTAATCTTGCTCTTGTAAGAGCAGATGTTTGTAGGCTTCCTTTCTCATCTGGTTCTGTTGATGCCGTCCACGCCGGCGCCGCCTTGCATTGTTGGCCATCTCCCTCCAATTCTGTCGCTGAAATTAGCCGGATTCTAAGAAGTGGTGGAATCTTTGTTGGAACCACTTTTCTCCGTTACTCTTCTACAACCCCATTAATTGTGCGCTTATTCAGAGAGAGTTTTTCAAGGACACATAAATTCTTAACAGAGCAAGAAATTGAAGGGCTTTGCATGTCATGTGGTCTCATCAATTACACAAGCAAAGTTCATCAGTCCTTTATCATCTTCTCTGCTCAGAAGCCTTAG 1077 0.4011 MREIEEVVACSGKGESGSNGFNFMNAKCMYHLLHVAFLLVKNKNIVAIELDLDLDGNNGFFSSSSTTIPKMPLSFFEIREIEKDYFACPICYEPLIRKGPSGLNLSAIYRSGFKCKRCRKSFSSKDKYLDLTVTSGLLDYTENQPYLTELFRSPFVSFLYERGWRQNFNLGGFPGPEEEFKMAQDYFQSAKGGCIVDVSCGTGLISRKFAKSGSYSGVVALDFSENMLRQCYDFINKDDILLKANLALVRADVCRLPFSSGSVDAVHAGAALHCWPSPSNSVAEISRILRSGGIFVGTTFLRYSSTTPLIVRLFRESFSRTHKFLTEQEIEGLCMSCGLINYTSKVHQSFIIFSAQKP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3171 358 PANTHER METHYLTRANSFERASE 64 357 - -
Amo01g3171 358 CDD AdoMet_MTases 195 301 - -
Amo01g3171 358 Pfam Methyltransferase domain 196 296 IPR013216 GO:0008168
Amo01g3171 358 Gene3D Vaccinia Virus protein VP39 150 357 IPR029063 -
Amo01g3171 358 PANTHER - 64 357 - -
Amo01g3171 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 160 357 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3171 Amo-Chr1 103632943 103635404 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Amo01g3171 Methyltransf_11 1.7e-19 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3171 - - ahf:112723357 567