Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3170 ATGATCATGGGATACAAGCCTGCATGGTTGGAAGCACTATACAGAGAGAAGTTCTTTGTGGGATGTTCGTACCATGAGAAGGCGAAGAAGAACGAGAAGAACGTGTGCTGCTTGGATTGCTGCATAAGCATATGTCCACACTGCTTCCCTTCTCACCGCTTCCATAGGCTTCTTCAGGTTCGCCGTTACGTTTACCATGACGTCGTCAGATTAGAAGATCTTCAGAAACTCATTGACTGCTCCAACGTCCAACCTTACACCATTAACAGCGCCAAAGTTGTCTTCATCAAGAACAGGCCTCAGAACCGCCAATTCAAATCCTCCGGCAATTACTGCACTTCCTGTGACCGTAGCCTTCAAGAGCCTTTTATTCATTGCTCTCTTTCATGCAAGGTGGAATTTGTGCTGAAACACTACAAGGATCTATCACCATACTTAAGGACATGCAAGACCCTACAGCTAGGTCCAGACTTCTTGATCCCACAAATTCAGGAGATGGGGGAGGAGGAGATGACAACTACTGGAGGTTCATCATCAACAATTGTGGACAGTGATGAGCCAATGAGTTCTTGCTATTCATGGGGTTCGTCATCAGGATCAGAGAACATGAGCATGGGTTGCAGTACTGATCAGAACATAGTGAGGAAGAAGAGGAGTGGATGGAAGGTGTGTGCAAGGCTAATGACAAATTCCAGCACCAACAAAGTTTCGGATGAAGACATGGCCACCAGTATCAGTAGGAGAAAAGGCATTCCTCATAGATCTCCTCTATGTTAA 777 0.4582 MIMGYKPAWLEALYREKFFVGCSYHEKAKKNEKNVCCLDCCISICPHCFPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKNRPQNRQFKSSGNYCTSCDRSLQEPFIHCSLSCKVEFVLKHYKDLSPYLRTCKTLQLGPDFLIPQIQEMGEEEMTTTGGSSSTIVDSDEPMSSCYSWGSSSGSENMSMGCSTDQNIVRKKRSGWKVCARLMTNSSTNKVSDEDMATSISRRKGIPHRSPLC* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3170 258 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 258 - -
Amo01g3170 258 MobiDBLite consensus disorder prediction 235 258 - -
Amo01g3170 258 Pfam PLATZ transcription factor 61 132 IPR006734 -
Amo01g3170 258 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3170 Amo-Chr1 103618201 103619682 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Amo01g3170 PLATZ 5.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3170 - - gmx:100810461 402.519