Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3167 ATGGTGAGCTTGAAAGGGGGAACAAGGCCACCATGGGTGGGGCTGGGAGCTTCCGTGTGGGTTCAGGTGGCATCGGGAAATGGTTACACTTTCCCGCTCTATTCCCACTCTTTGAAGTCTGTCATGGGCTTCAACCAGCAGCAACTCACTCTCCTCGGTGTTGCCAACGACATCGGCGAGAATGTTGGTATTCTTCCTGGCCTTGCTTCCAACCACTTCCCTCCATGGCTTCTCCTCTTCATCGGTGCTCTCTTCTCCTTCATTGGCTACGGCCTTCTCTGGCTCCCCCTCAGCCACACCCTCTCTTCTCTTCCCTACGCCTTGCTATGGTTTTCCCTGGTTGTTGCAACCAACAGTTGTGCGTGGTTAACCACCGGGATTCTTGTAACCAACATGAGGAATTTCCCTATCAGCAGAGGCACGGTGGCCGGAATCCTCAAAGGGTACGGCGGCCTCAGCGCCGCCGTCTTTACTCAAATCTACGGGATAGTTCTTCACAATTCATCCTCCAATTTCCTCTTGTTCCTTGCAATTGGTATCCCTGCTGTGTGCTTCAGCATGATGTTTCTTGTTAGGCCTTGCACTCCACTTTCCACTGAAGATTCCAAAGAGAAAGGGCATTTTCTGTTCATCCAAGCTTCAAGTGTGGTATTGGGTTTATACATTCTTGCCACAAACATATTTGGTGACATTCTCCGCTTGAGTAGTGCACTTTCCTACCTCTTGGTGGCTCTCATGATTCTACTCCTCATGGCTCCACTTGCTATCCCTATCAAGATGACACTCTGTCCCAAAACAGGATCCACCCGATCACAAACACCTAATGCCTCCTCAGAACGTTTGGCCAAAGAAGACAACACCGAGCCGCTGCTGGCGTCTTCCTCGGCCAGTGGCCTCGGAAGCTTCTACGACACGGATCCCTCGGCCGAGGTGGCAATGCTTCTGGCCGTGGGCGAGGGAGCCGTGAAGAAGAAGAGAAGGCCTAAAAGAGGGGAAGATTTTAAGTTCACAGAGGCAATAGTAAAGGCTGATTTCTGGCTACTGTTTTTCATTTACTTTGTTGGTGTTGGAACTGGGGTCACTGTAATCAACAATCTAGCACAAATTGGCATTGCACAAGGTGAGGATGATACCACTATCTTGTTGTCCCTTTTCAGCTTTTTCAACTTTGTTGGTCGCCTTGGTGGAGGAGTTCTTTCAGAACATTTTGTCAAAACGAAAACAATTCCGCGCACGGTTTGGATGACATGCACTCAGGTAATGATGATGATCCTATACATCCTGTTTGCATATGCTATCAATGGGGCCCTATACCCTGCCATTGCACTTCTTGGAATCTGCTATGGAGTGCAATTCACAGTGGTGATTCCAACTGTGTCTGAGCTTTTCGGTTTGGAGCACTTTGGGATGTTGAGCAACTTCATATTCATGGGGAATCCACTTGGTGCATTCCTCTTCTCAGCACTTCTAGCAGGTACTGTGTATGACAATGAGGCTACAAGGCAACAAAGCATGGGAATCATTCCTTCAAGTGCTTCTTGCTTGGGCCCTGATTGCTTTAAGATCACATTCCTCACACTTTCTGCTGTTTGTGCTGTTGGTGCCTTTGCTGGTACCATCTTGGCTGTAAGAATTAAGCCTGTTTACCAAATGCTTTATGCTGGTGGTTCTTTCAAGTTACCACAAACTTCTTCTTCACTTCACTAA 1707 0.4827 MVSLKGGTRPPWVGLGASVWVQVASGNGYTFPLYSHSLKSVMGFNQQQLTLLGVANDIGENVGILPGLASNHFPPWLLLFIGALFSFIGYGLLWLPLSHTLSSLPYALLWFSLVVATNSCAWLTTGILVTNMRNFPISRGTVAGILKGYGGLSAAVFTQIYGIVLHNSSSNFLLFLAIGIPAVCFSMMFLVRPCTPLSTEDSKEKGHFLFIQASSVVLGLYILATNIFGDILRLSSALSYLLVALMILLLMAPLAIPIKMTLCPKTGSTRSQTPNASSERLAKEDNTEPLLASSSASGLGSFYDTDPSAEVAMLLAVGEGAVKKKRRPKRGEDFKFTEAIVKADFWLLFFIYFVGVGTGVTVINNLAQIGIAQGEDDTTILLSLFSFFNFVGRLGGGVLSEHFVKTKTIPRTVWMTCTQVMMMILYILFAYAINGALYPAIALLGICYGVQFTVVIPTVSELFGLEHFGMLSNFIFMGNPLGAFLFSALLAGTVYDNEATRQQSMGIIPSSASCLGPDCFKITFLTLSAVCAVGAFAGTILAVRIKPVYQMLYAGGSFKLPQTSSSLH* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3167 568 SUPERFAMILY MFS general substrate transporter 234 547 IPR036259 -
Amo01g3167 568 CDD MFS_Mch1p_like 10 535 - -
Amo01g3167 568 Pfam Nodulin-like 11 258 IPR010658 -
Amo01g3167 568 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 566 - -
Amo01g3167 568 MobiDBLite consensus disorder prediction 266 280 - -
Amo01g3167 568 MobiDBLite consensus disorder prediction 266 296 - -
Amo01g3167 568 Gene3D MFS general substrate transporter like domains 341 549 IPR036259 -
Amo01g3167 568 SUPERFAMILY MFS general substrate transporter 17 196 IPR036259 -
Amo01g3167 568 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3167 Amo-Chr1 103571787 103574581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3167 5 564 Nodulin-like Gene Family AT1G80530 55.674 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3167 - - gmx:100787328 822.002