Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3119 ATGGCGTTTGATCAAAATTCCGTAACAAAAGATCTGCGTCCGCTGAATGTAGCTACGACCTTGGCTATGGCGGAGGAGCACTTTGTTTCACCGCCGACCACCGCCACAGCCACCACACCTCCCACGCCCAATTCGGGTCGTGAAATGGGAAGCCCCGGCACGCCGCAGGTACCTCTTTTCTACTCACCTACAGTCTCTGACGGCGCCACCCTCGTTGGATTGAGCTACGGGAATGTGCCCTCCACCGCTGGCACTACGTGGTGCTTACGTCCCGCCATGTCCATTGCCCATCCCAATGCGAACCCTGCCATTGGGTTTAATTATGGTCATAGTTGTTGTAATAGGGTTGCACCTGGCAATGCTACTTTGAATTTGGGGAACTGGGTGGGGACTAATGGCGCAATGGATAAGGCTTGTAATGATGCTGGTAGTGGTTTTCCTGCCTACGGTGGTCTTAGGATTAACAGGGTCGTTGCCAACGCCACTGATCAGGCTACTTATGGCCATACTGCTGGCCACCGGGCTGATCATGTTGTTGAGGATGGTGGCGGTAGTGGTGGCGGCGTCGATGAATCTGTTTCTGGGAGGAAAGTGAAGTTCTTGTGCAGCTTTGGCGGGAGGATTTTGCCGAGGCCTAGTGATGGCATGTTGAGATATGTTGGAGGGAAGACTAGGATTATTAGTGTTAGGAGAGATGTGAGATTCAATGATTTGATGCAGAAGATGGTTGATACTTATGGGCAGCCTGTGGTTATAAAGTATCAGCTCCCTGAGGAGGAGCTTGATGCACTGGTCTCAGTTTCGTGCCCCGATGATGTTGAGCATATGATGGAGGAGTATGAAAAGTTGATGGAGAGGTCCCCTGACGGCTCTGCTAAATTGAGGGTTTTCCTTTTTTCTGCTGCTGATCTTGAAATCTCCGGCGGGATGCACTTTGCTGACTTGCAGGATAGCGGTCAGAGATATGTCGAGGCCGTGAATGGAATTGCAGATGAGATTAGTATTGGAATCACTAGGAAGGAGAGCGTTACAAGTGCAGCCTCAACTCAGAATTCTGATTTGAGTGGCTCGGAGACCCTTGATAGTTTAATTTCTGGTGATGTAAGTGCAGTGCCTAAGGGAAATGTAGCAGCTTCTTCTGACACTCCTTCAAATTTGATGGCTTCTGATGCCAGTGGAGCTTCTGCAGTTTTGATGGGCATGTCGGCTGCTAGGACTCCAACCCACGCACCATATTTCCATAATGAGGTCGACCTAGAGAGGTCTATACCTGCTACAATGTCTCAGCAGTCAGTTGGGTTGCAGCAAAGTGGAATGGAAGTTCCATATTCTTCACCTTATTTACAGCCCTTTTTTGATTTGCGCCAGGAAGTTATGAATTATGCAGATTATGTCCAGATGCCTCCACAGACAGGGTTTCGAAATGCTCAGCTTCTAGGGAAGACAGGGCAAGTCTTCACTCAACCACAGTTTCATGATAACAATCCAGGTTCAGCATCTCATCAGGTCATTCCTGGCATGCAAATGACATTTACTCAACAAGGCATGCCTTCTCATGTTGGTGTGAGGTCAAATGTCGTCCAACCACAACCTGTGATGCAACTACAGCAAAATCGTTCAGAGCAGTATAATGATGAAAATACATCAGGGATGAGAATTTTCCAGCTTCCCACTGAGCAAGGTTACAACACTTACCAGGTTCCAATGAATCGAGTCCCTTCTGTCATCGTTGGAGGTAATTATGGCTGGGTTCAGGTTCCTTCACAAGATCAAGTTGTTTACTCTGATGGGTTATTACCCCAACAACAGGTAATGGTCCCTGAGAAAAGCCAAAGAGTGGAGGACTGTTCATTATGCCAAACAAAACTGCCTCATGCACATTCCGATTCAGTGGTTCAAGATCAACATATTAATGGTGCAGGATCAATTCCTGATTCAGTCCCAGCTTATCATAGTCTCCCCACGGAGGACAACTCAAGAGCTCAAGCTACAAACAATGTTATGTCAAGGGAAGGTATTGCTGAACAAGTGTCCCAGGCCAAACCACAGGTTATTAGAAAACCGGAGTCCCCAGATGGACTAACTTGTACTGAAAAAACTGCACCTCCTCAAAATCTTGAGCCACAACCTGAGGGAGTTAGAATTTTTACGCAAAAGCTAGATGGTTCTGATTATCCTAGAAATTCAACTATGTACGAAACCATTGGAAGGACAGGGGGGAAACAATGTCCAACACTGTCTCCAATTGATGGGCTCATGGGAAGTTCACCACTATCTTATATTGATGATGTTGCCCACCGGCATATGTCTCCAGTTGAAAACTCGAGTAAACAGGATGTGTTTGTGAATAAAACTGGCCATAACAATATTTCTAGAGTTGATGGGAATGGGACAGCTACACAAACTTCAGAATGCATGGCCCAAGGATCTCCAAAAGAATATACTACTGAGCTTTCTGGTGTTGTACCAAAGTCAGAGTTGGTGGATAAGATTACACAGGACCATCTGAAACCTATTGATGGAAGGATGGACACCCTCAATGTACGCATTCCTGAAGTTCATGTGAGTAATGATCGCTGCTTTCAGCCGGTTGATAAATCTAGCGGGATTGCTAGGGTTCCTAGTATGCTGCCTTCTTCTACAGAAATTTTGTATGCCCATAATTCTAGGCCAGGGGAATACAATGAGGTTGCACAACACCCTGTTTGGGGCATTCCTGGTTTGAATCATCAGTCACAAGTAGCAAACCACCACAAGGATGAAACAACTTCATCAATATCACAATCTGTAAGGTTTGGAGATATTCAGGATTCGACAAACTCACTTTTCAGCAATCAAGATCCTTGGAATATACAGCATGGTACCTTCTTTCCAATTGCTAGACCTAACAAAGCTGTTTTGAAGAAAGAAACCTATTCTCATGGGCATGACTTTGGTGAGTTTCCAGGCAACTCTGGCGAACAAAATTTAGGAGCACAATTTGATGATGGCCTCTACCAGTCTTTGAAACAGCATTTACCTTTAGAACATGTTCGATCTGCCAAAGGTTCAGCAGAAGATCAACAACTACAGGCTGTTGCTGAAGATGTAGCAGCTTCTGTTCTGCACTCAAGAATTCCTTCAAATCCTGACTTGCATGCAAGGGACAATATGTACCTTGAAAACACAGAGGATGGTGAAGATAAAAACAATCTGATAGATGTTTCTGAAACTCAGAGCATCAAGAGCAAGCAACCAGAAACGACAAATTTTGGCTTTCCAGCATCAGATGTTGGAGGATTGCAGGTAATAAAGAACTGTGACCTTGAAGAGCTTACAGAATTAGGATCTGGTACATTTGGGACTGTGTATCATGGAAAATGGAGAGGCACTGATGTTGCAATCAAGCGGATTACTGATAGGTGCTTTGCAGGAAAGCCTTCAGAGCAAGAGCGAATGAGAGCTGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCACCCAAATGTGGTGGCATTCTATGGTGTTGTCCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAATATATGGTTAATGGTTCTCTAAGAACTGCCTTGCTGAAGAATGGGAGGAACCTTGACAAGCGCAAGCGACTCTTGATTGCAATGGATGTGGCCTTTGGTATGGAGTACCTGCATGGAAAAAACATAGTTCACTTTGACTTGAAAAGTGATAACTTGCTTGTGAATCTCCGAGATCCCCACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTTTCCAAAGTGAAGCGTCAGACACTGATCTCTGGTGGTGTGAGAGGAACTCTACCTTGGATGGCTCCAGAGCTGCTGAATGGGAGCAGTAGCCTTGTTTCGGAGAAGGTTGATGTTTTCTCATTTGGTATTGTGATGTGGGAACTCTTGACTGGAGAAGAGCCATACGCTGATTTGCATTATGGTGCCATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCAGTTCCGGAATCTTGCGATTCAAAATGGAGGTTGCTGATGGAGACTTGCTGGTCCTCAGAACCATCGGAGAGACCTAGCTTCACTGAGATTGCCAATGAATTGCGATCCATGGCGACCAAGATCACTGCCAAAGGTCAAGCCCAACAGCAGCAGCAACCCTCTTCCTTGCAGAGCCAAGTGCAGAAATGA 4182 0.4596 MAFDQNSVTKDLRPLNVATTLAMAEEHFVSPPTTATATTPPTPNSGREMGSPGTPQVPLFYSPTVSDGATLVGLSYGNVPSTAGTTWCLRPAMSIAHPNANPAIGFNYGHSCCNRVAPGNATLNLGNWVGTNGAMDKACNDAGSGFPAYGGLRINRVVANATDQATYGHTAGHRADHVVEDGGGSGGGVDESVSGRKVKFLCSFGGRILPRPSDGMLRYVGGKTRIISVRRDVRFNDLMQKMVDTYGQPVVIKYQLPEEELDALVSVSCPDDVEHMMEEYEKLMERSPDGSAKLRVFLFSAADLEISGGMHFADLQDSGQRYVEAVNGIADEISIGITRKESVTSAASTQNSDLSGSETLDSLISGDVSAVPKGNVAASSDTPSNLMASDASGASAVLMGMSAARTPTHAPYFHNEVDLERSIPATMSQQSVGLQQSGMEVPYSSPYLQPFFDLRQEVMNYADYVQMPPQTGFRNAQLLGKTGQVFTQPQFHDNNPGSASHQVIPGMQMTFTQQGMPSHVGVRSNVVQPQPVMQLQQNRSEQYNDENTSGMRIFQLPTEQGYNTYQVPMNRVPSVIVGGNYGWVQVPSQDQVVYSDGLLPQQQVMVPEKSQRVEDCSLCQTKLPHAHSDSVVQDQHINGAGSIPDSVPAYHSLPTEDNSRAQATNNVMSREGIAEQVSQAKPQVIRKPESPDGLTCTEKTAPPQNLEPQPEGVRIFTQKLDGSDYPRNSTMYETIGRTGGKQCPTLSPIDGLMGSSPLSYIDDVAHRHMSPVENSSKQDVFVNKTGHNNISRVDGNGTATQTSECMAQGSPKEYTTELSGVVPKSELVDKITQDHLKPIDGRMDTLNVRIPEVHVSNDRCFQPVDKSSGIARVPSMLPSSTEILYAHNSRPGEYNEVAQHPVWGIPGLNHQSQVANHHKDETTSSISQSVRFGDIQDSTNSLFSNQDPWNIQHGTFFPIARPNKAVLKKETYSHGHDFGEFPGNSGEQNLGAQFDDGLYQSLKQHLPLEHVRSAKGSAEDQQLQAVAEDVAASVLHSRIPSNPDLHARDNMYLENTEDGEDKNNLIDVSETQSIKSKQPETTNFGFPASDVGGLQVIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRTALLKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDSKWRLLMETCWSSEPSERPSFTEIANELRSMATKITAKGQAQQQQQPSSLQSQVQK* 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3119 1393 PANTHER SERINE-THREONINE PROTEIN KINASE 909 1372 - -
Amo01g3119 1393 PANTHER SERINE-THREONINE PROTEIN KINASE 172 872 - -
Amo01g3119 1393 Pfam Protein tyrosine and serine/threonine kinase 1105 1365 IPR001245 GO:0004672|GO:0006468
Amo01g3119 1393 MobiDBLite consensus disorder prediction 1372 1393 - -
Amo01g3119 1393 Pfam PB1 domain 217 300 IPR000270 GO:0005515
Amo01g3119 1393 Gene3D Phosphorylase Kinase; domain 1 1095 1189 - -
Amo01g3119 1393 CDD STKc_MAP3K-like 1108 1365 - -
Amo01g3119 1393 MobiDBLite consensus disorder prediction 686 709 - -
Amo01g3119 1393 ProSitePatterns Protein kinases ATP-binding region signature. 1108 1139 IPR017441 GO:0005524
Amo01g3119 1393 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 172 872 - -
Amo01g3119 1393 CDD PB1_UP2 201 299 - -
Amo01g3119 1393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1227 1239 IPR008271 GO:0004672|GO:0006468
Amo01g3119 1393 MobiDBLite consensus disorder prediction 31 52 - -
Amo01g3119 1393 Gene3D Transferase(Phosphotransferase) domain 1 1190 1393 - -
Amo01g3119 1393 ProSiteProfiles Protein kinase domain profile. 1102 1369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3119 1393 MobiDBLite consensus disorder prediction 169 190 - -
Amo01g3119 1393 SMART serkin_6 1102 1373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3119 1393 Gene3D - 218 301 - -
Amo01g3119 1393 MobiDBLite consensus disorder prediction 27 52 - -
Amo01g3119 1393 SUPERFAMILY Protein kinase-like (PK-like) 1096 1364 IPR011009 -
Amo01g3119 1393 SMART PB1_new 212 301 IPR000270 GO:0005515
Amo01g3119 1393 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 909 1372 - -
Amo01g3119 1393 PRINTS Tyrosine kinase catalytic domain signature 1292 1314 IPR001245 GO:0004672|GO:0006468
Amo01g3119 1393 PRINTS Tyrosine kinase catalytic domain signature 1184 1197 IPR001245 GO:0004672|GO:0006468
Amo01g3119 1393 PRINTS Tyrosine kinase catalytic domain signature 1221 1239 IPR001245 GO:0004672|GO:0006468
Amo01g3119 1393 PRINTS Tyrosine kinase catalytic domain signature 1336 1358 IPR001245 GO:0004672|GO:0006468
Amo01g3119 1393 SUPERFAMILY CAD & PB1 domains 213 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3119 Amo-Chr1 102581486 102589428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3119 196 673 MAP Kinase Kinase Kinase AT3G46920 38.821 1.89e-83 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo01g3119 PK_Tyr_Ser-Thr 5.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3119 - - gmx:100819234 1569.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3119 01 102581486 102589428 Amo03g2089 03 77777238 77785962 PCT