Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo01g3103 | ATGTCAGGTTGGGACGAAGGAGCCGTCTACTACAGCGACCAAGCCCACTCATGGCACGACGGCAACCACCCCGGCGACCCCGACGCCACCGCATCGAACCACACCATCCAACAGAAATTCAAGGAGTTCATTCGCAACTTCAGTAAGAACGGTCTCTTCCCTTACAGACAAAACCTCCTCGACAACCCTAAGTTCCTCCTTGTCAGATTTGAAGACCTCGACGAATTTGCTCCCGAACTCTCCCCTAAGCTCGAGTCTTCCCCCGCCGACTTCTTGCCCTTGTTCGAAAGCGCCGCGGCGCAGGTTTTGGGGAGTTTGAAGACTAAAGTCACTGGCGATACCGGAGAGCTGGAAGATCAGGTTGCCGGCGATGTCCAGATTCTGCTTACTTCCGACAAGGATCCTGTATCCATGAGGTCGCTCGGGGCCCAAAACATATCGAAGCTTGTTAAAATTGCTGGGATTACTATAGCTGCATCAAGGACTAAGGCAAAGGCAACTTATGTTACCTTAGTATGTAAGAACTGCAAGAAAGGGAAGCAAATTCCGTGCAGGCCAGGACTTGGGGGAGCAGTTGTTCCTCGATCATGTGATCATATTCCTCAGGCTGGAGAAGAACCATGCCCAATTGACCCATGGCTTGTGGTTCCTGACCAGAGCCAGTATGTTGATCAACAAACATTGAAACTGCAAGAAAACCCAGAGGATGTTCCAACCGGTGAGCTACCTAGAAACCTGCTCCTCTCTGTTGATCGTCATCTAGTTCAAACAGTGGTACCTGGCTCAAGATTGACAGTCACTGGAATCTTCAGTATTTTCCAAGCTTCCAACGCTGCATCTAACAAAGGAGCAGTGGCAGTTAGACAACCATATATTAGGGTTGTAGGAATGGAAGACACAAATGAAGCCAAGTCTGGTGGTCCTTCTGCGTTTACACCAGAAGAGATAGAAGAATTCAAAAAGTTTGCAGCTGAACCTGATGCATATAAAAATATATGCTCCAAGATTGCTCCCTCAATATTTGGGCATGATGACGTCAAGAAGGCTGTGGCCTGTCTTCTTTTTGGTGGGTCAAGAAAGAACTTGCCAGATGGAGTGAAGTTAAGAGGTGATATCAATGTGTTGCTTCTTGGGGATCCATCTACAGCAAAATCACAGTTTCTGAAGTTTGTTGAAAAGACAGCTCCTATTGCTGTCTATACTTCCGGGAAAGGCTCATCAGCTGCTGGTCTCACAGCTTCTGTAATCAGAGATACCAGCACTCGTGAGTTTTACCTTGAAGGAGGGGCTATGGTCTTGGCAGATGGAGGCGTTGTCTGCATTGATGAATTCGACAAGATGAGACCAGAAGATAGGGTCGCCATCCATGAAGCCATGGAACAACAAACTATATCTATAGCTAAAGCAGGAATAACTACAGTTCTTAATTCTAGGACTTCTGTTCTTGCTGCTGCTAATCCTCCATCTGGACGATATGATGATCTTAAGACTGCACAGGATAACATTGATTTGCAGACAACCATTCTTTCTAGATTTGATTTAATCTTTATTGTGAAAGACATCAGAATTTACAGTCAAGACAAGATCATAGCTAGTCATGTCATAAAGGTCCATGCATCAGCTGATGCAACCGCTAGTGAGAACAGGGTTTCTAAAGAAGAGAATTGGCTGAAGAGGTATTTACACTATTGTCGGACTGAATGCCACCCTCGTCTATCAGAATCTGCTGCAACATTACTGCAGAACAATTATGTGAAAATCAGGCAGGATATGAGGCAGCAAACCAATGAAACTGGAGAAGCTGCTGCAATACCAATTACAGTAAGGCAGCTGGAAGCTATTGTTAGGTTGAGTGAGGCACTTGCCAAAATGAAACTATCTCATGTTGCTACTGAGGAGCATGTGCAAGAAGCAATAAGGCTTTTCACCGTGGCTACAATGGATGCTGCTAGGTCTGGAATACACCAACAAATCAGTCTCACACCAGAAATGGCAAATGAAATAAAGCAAGCAGAAACTCAGATAAAGAGAAGAATTGGGATTGGAAACCACATATCAGAAAGAAGGCTTATTGATGACCTCAGCAGAATGGGAATGAACGAATCCATTGTGAGAAGAGCTCTTGTGATCATGCACCAGAGAGACGAAGTAGAGTACAAGCGAGAAAGGCGCGTTATATATAGGAAAGCATGA | 2193 | 0.4533 | MSGWDEGAVYYSDQAHSWHDGNHPGDPDATASNHTIQQKFKEFIRNFSKNGLFPYRQNLLDNPKFLLVRFEDLDEFAPELSPKLESSPADFLPLFESAAAQVLGSLKTKVTGDTGELEDQVAGDVQILLTSDKDPVSMRSLGAQNISKLVKIAGITIAASRTKAKATYVTLVCKNCKKGKQIPCRPGLGGAVVPRSCDHIPQAGEEPCPIDPWLVVPDQSQYVDQQTLKLQENPEDVPTGELPRNLLLSVDRHLVQTVVPGSRLTVTGIFSIFQASNAASNKGAVAVRQPYIRVVGMEDTNEAKSGGPSAFTPEEIEEFKKFAAEPDAYKNICSKIAPSIFGHDDVKKAVACLLFGGSRKNLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDTSTREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRIYSQDKIIASHVIKVHASADATASENRVSKEENWLKRYLHYCRTECHPRLSESAATLLQNNYVKIRQDMRQQTNETGEAAAIPITVRQLEAIVRLSEALAKMKLSHVATEEHVQEAIRLFTVATMDAARSGIHQQISLTPEMANEIKQAETQIKRRIGIGNHISERRLIDDLSRMGMNESIVRRALVIMHQRDEVEYKRERRVIYRKA* | 731 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo01g3103 | 730 | Gene3D | - | 138 | 273 | IPR012340 | - | |
| Amo01g3103 | 730 | Pfam | MCM N-terminal domain | 37 | 118 | IPR027925 | - | |
| Amo01g3103 | 730 | Gene3D | - | 31 | 121 | - | - | |
| Amo01g3103 | 730 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 59 | 676 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Amo01g3103 | 730 | ProSiteProfiles | MCM family domain profile. | 328 | 534 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Amo01g3103 | 730 | Pfam | MCM P-loop domain | 316 | 538 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Amo01g3103 | 730 | Coils | Coil | 577 | 597 | - | - | |
| Amo01g3103 | 730 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM5 | 59 | 676 | - | - | |
| Amo01g3103 | 730 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 640 | 657 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
| Amo01g3103 | 730 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 165 | 177 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo01g3103 | K02209 | - | gmx:100779483 | 1238.79 |
Showing 1 to 1 of 1 entries