Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3074 ATGGGAGATAGACGGAGTGAGGGTTCAGCGTCGACGCTGCTGCAGGGGAAGTATGAGTTAGGGAGGCTTCTTGGAACGGGGACGTTCGCGAAGGTGTACCACGCGCGGAACGTGGAAACGGGGAAGAGTGTGGCGATGAAAGTGGTTGGGAAAGAGAAGGTGATAAAGGTTGGGATGATGGAGCAGATTAAGAGAGAGATCTCGGTGATGAAGATGATGAAGCATCCTCATATCGTTGCGCTCCACGAAGTAATGGCTTCCAAATCCAAGATCTACATCGCCATGGAGCTCGTCCGGGGCGGCGAGCTCTTCAACAAAATTGCCACAAGGGGACGCATGAGGGAGGACCTTGCGAGGCTCTACTTCCACCAGCTTATCTCCGCCGTCGATTTCTGCCACAGCCGTGGCGTCTACCACCGCGATCTCAAGCCGGAGAATCTCCTCCTTGACCACAACGGCAACCTCAAGGTCTCTGACTTCGGACTCAGCACTTTCTCCGAGCATCTCCGCCAGGACGGCTTGTTGCACACAACTTGCGGCACTCCGGCATACGTCTCGCCGGAGGTGCTCGCGCGGAAGGGATACGACGGCGCCAAGGCCGATATATGGTCCTGCGGCGTCATCCTGTTTGTGCTTCTTGCAGGTTGCTTGCCTTTTCAGGACGATAACCTTGTTGCGATGTACAAGAAGATTTACAGAGGAGATTTCAGGTGTCCGCCGTGGTTCTCCGGCGATGCAAGGAGGCTCATCACCAAGCTGCTCGATCCGAACCCGAATTCTCGCATCACCATTTCGAAAATCATGGAGTCACCGTGGTTCAAGAAACCTGTTCCGAAGAACATGCTACGGGGGATGAAGGAGGAAGACGAAGAGGAGAAGGAGAAAGAGATAGAGGAGAAGATGAAGCAGCCATCGACGATGAACGCGTTTCACATAATATCGTTATCCGAAGGGTTTGATTTGTCGAGGTTGTTCGAGGAGAAGAAGAGGGAGGAGAGGGAGGAGATGAGGTTTGCGACGGCGGGGACGGCGAGCAGCGTGATATCTCGACTGGAGGAGGTGGCGAAGGCGGTGAAGTTCGACGTGAAGAGGAACAGCGATGAGACGAAGGTGAGGCTGCAGGGGCAGCAGAGAGGAAGGAAGGGGAAGCTGGCAATTGCGGCGGATATATACGCCGTGACGCCGTCATTCCTGGTGGTGGAGGTGAAGAAGGATAACGGTGACACTTTGGAGTACAACCAGTTCTGCAGCAAGGAGCTTCGCCCTGCACTCAAGGATATCTTCTGGACTTCCCCACCTGAGAATACCACACCTGCTTAA 1320 0.5455 MGDRRSEGSASTLLQGKYELGRLLGTGTFAKVYHARNVETGKSVAMKVVGKEKVIKVGMMEQIKREISVMKMMKHPHIVALHEVMASKSKIYIAMELVRGGELFNKIATRGRMREDLARLYFHQLISAVDFCHSRGVYHRDLKPENLLLDHNGNLKVSDFGLSTFSEHLRQDGLLHTTCGTPAYVSPEVLARKGYDGAKADIWSCGVILFVLLAGCLPFQDDNLVAMYKKIYRGDFRCPPWFSGDARRLITKLLDPNPNSRITISKIMESPWFKKPVPKNMLRGMKEEDEEEKEKEIEEKMKQPSTMNAFHIISLSEGFDLSRLFEEKKREEREEMRFATAGTASSVISRLEEVAKAVKFDVKRNSDETKVRLQGQQRGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIFWTSPPENTTPA* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3074 439 Gene3D Transferase(Phosphotransferase) domain 1 100 278 - -
Amo01g3074 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Amo01g3074 439 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Amo01g3074 439 ProSiteProfiles Protein kinase domain profile. 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3074 439 CDD STKc_SnRK3 17 272 - -
Amo01g3074 439 PANTHER - 10 437 - -
Amo01g3074 439 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Amo01g3074 439 Coils Coil 279 299 - -
Amo01g3074 439 SMART serkin_6 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g3074 439 CDD CIPK_C 308 425 - -
Amo01g3074 439 Gene3D Kinase associated domain 1, KA1 301 430 - -
Amo01g3074 439 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165
Amo01g3074 439 SUPERFAMILY Protein kinase-like (PK-like) 15 281 IPR011009 -
Amo01g3074 439 Pfam NAF domain 304 363 IPR004041 GO:0007165
Amo01g3074 439 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 437 - -
Amo01g3074 439 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3074 Amo-Chr1 102072682 102074684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3074 8 433 CBL-interacting serine-threonine protein kinases AT4G30960 73.256 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo01g3074 Pkinase 8.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3074 - K07198 gmx:547644 687.952