Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3049 ATGCCAACCCGATGTGAAATTTGCTGCGAGATTTTGATCGCCATCTTGCTCCCCCCACTCGGTGTTTGCTTCCGCCATGGTTGCTGCAGTGTTGAATTCCTCATCTGCTTGCTGTTGACTATTCTAGGGTATATCCCTGGGATAATTTATGCACTTTATGCCATTGTCTTTGTTGATCGTGATCAGTACTTTGATGAGTATAGGCGCCCTCTCTATGCACAATACTAG 228 0.4561 MPTRCEICCEILIAILLPPLGVCFRHGCCSVEFLICLLLTILGYIPGIIYALYAIVFVDRDQYFDEYRRPLYAQY* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3049 75 Pfam Proteolipid membrane potential modulator 8 56 IPR000612 GO:0016021
Amo01g3049 75 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016021
Amo01g3049 75 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 73 IPR000612 GO:0016021
Amo01g3049 75 PANTHER BNAA03G50460D PROTEIN 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3049 Amo-Chr1 101821882 101826793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3049 1 74 RCI2 Gene Family AT4G28088 80.000 3.68e-40 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3049 - - gmx:100306426 139.043