Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3045 ATGCAGCAAGGTGATCAGACGGTGATTAGCTTGAGGCCTGGTGGTGGTCGAGGCGGCGGCTCCGGCGGTGGTAGCAGGTTCCTTGCTCCTCGATTCGACTCCTCCTCTTCTGCTTCCTCCACGACTTCTGCCTCCCTTGCCTTCGGCGATCTTCCTCTCCTCCGCCCCCATGGCGGCGCTTCTTCAGCGTTCTCCATCAAGGCTGGAGATTCACGATTTGAGGGTCGCGAGCGGGTGCGTTATACCAGGGATCAGCTTTTACAGCTCCGAGAGGCTGTTCAAATCCCTGATGATATTTTGAAGATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAGGATCAAAATCAAAGTTGGGGACGCTCAGAGAACAACCCTCCACCTCAATTTCAAAATAGATACTCTGAACCTGACAATCGTGACTGGCGTGGCCGGTCTGGGCAGCCTCCTCCTGCAAATGCCGATGAGAGGTCCTGGGATAATCTCAGGGACAGGGAGAATAGGGAGTTTGGCAATACTAGTCAGGTTAATCGTCAAGACCAACTGAATTCTCAGTTTGCAAGGGCACACATCTCATCTAACCAAGTGGGAGGACCTTCTCCTACTCTGGTCAAGGCTGAGGTGCCATGGTCCGCTAGAAGGGGAAGTCTCTCTGAAAAGGATCGTGTCCTGAAGACTGTTAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATCTTCTAAAGGGTCAGTTGATTGATGCAGGCATAACATCAGCTGACATACTCAAGGGGGTCATTTCGCTTATATTTGATAAGGCAGTGCTAGAGCCAACATTTTGCCCCATGTATGCTCAGCTCTGTTCTGATCTTAATGAAAAGCTGCCTCCTTTCCCATCAGATGAACCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATATCTGCCAGGAGGCATTTGAAGGTGCAGATAAGCTGAGGGAAGAACTTAGGCAAATGACTGCTCCTGATCAAGAGATGGAGCGCCGTGACAAGGAGAGACTTGTCAAGCTTCGTACCCTTGGAAACATCCGCTTAATTGGAGAGCTGCTGAAGCAAAAAATGGTTCCAGAAAAGATTGTCCATCACATTGTTCAGGAGCTTCTAGGACCTCCTGACAGCAAGATCTGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCAATTTTTCAACACCATTGGTAAGCAGCTCGATGAAAGTCCAAAATCACGGCGGATAAATGATATTTACTTCAACCGGTTGAAAGAGTTGAGCACAAACTCCCAACTTGCACCACGTCTGAGGTTCATGGTTCGCGACGTTCTAGATTTGCGTTCTAATAATTGGGTTCCAAGACGTGAAGAGGTGAAAGCTAAGACCATCACTGAAATTCATTCCGAGGCCGAAAAGAATCTTGGTCTGCGCCCAGGTGCTACTGCAAGTATCAGAAATCCCCGTGGTGTAGTTTCTGGTGTTCCTGGAAATACCAACCCTGGGGGCTTCCCCATTGCCCGACCTGGCACTGGGGGCTTGATGCCTGGGATGCCTGGGACAAGGAAGATGCCTGGGATGCCTGGAATTGATAATGATAATTGGGAGATGCCTAGGACTAGATCAATTCCAAGAGGTGACATTTCAGGTGCTCAAACTGCAGGACGTGGCCAGTCTCCTATGTTTTCCAAGTCATCAACCCTGAGCTCTAAGTATCTACCTCAAGGAAGTGCTGGTCTTATGAGAAATAGTGCCTTAGTGCATGGAGGGGGTGGACCTCCTGCTCGTCCATCAAATTATGGTTTTGGTTCTGAGCCTGCACCTCAGGTCGCTTCACCTGTTAAAGCCGCTCCTCCCGCTGTGTCCTCTGAGAAAGCACAGGCTCCAGTTGTAAAATCGGATACTGCTGATCTTCACCGGAAAACAGTGTCTCTTCTGGAAGAATATTTCAGTGTTCGCCTCTTGGACGAGGCACTGCAGTGTGTGGAGGAACTAAAATCACCTGCTTACCACCCAGAGTTTGTCAAGGAAGCCATTTCTCTTGCTCTGGATAAAAGTCCACCCTGCGTTGAACCTGTTGCCAATCTTATCGAGTATCTTTTGATGAAGAAGATCCTTGTGCCTAGAGACATAGGAACTGGTTGCTTGTTATTTGGTTCAATGATTGATGATATTGGCATAGACTTGCCTAAAGCACCAAACAATTTTGGGGAGATAATAGGAAGACTGATTTTGGCTGGAGGTTTGGACTTTAAGGTGGTGAGGGAGGTACTTAAGAAGGTGGAAGATGACCGGTTCCAGAAAGTAATATTCGACAGCGCTATGCATGTCATCAGCTCTGCATCCGGGCAAGCAGTGTTAGAATCACAAGCGTCGGATATTGACGCATGCCGGGGACTGTTCCAGTGA 2406 0.4809 MQQGDQTVISLRPGGGRGGGSGGGSRFLAPRFDSSSSASSTTSASLAFGDLPLLRPHGGASSAFSIKAGDSRFEGRERVRYTRDQLLQLREAVQIPDDILKIKQDIEAELFGEDQNQSWGRSENNPPPQFQNRYSEPDNRDWRGRSGQPPPANADERSWDNLRDRENREFGNTSQVNRQDQLNSQFARAHISSNQVGGPSPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADKLREELRQMTAPDQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKICPAEENVEAICQFFNTIGKQLDESPKSRRINDIYFNRLKELSTNSQLAPRLRFMVRDVLDLRSNNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNPRGVVSGVPGNTNPGGFPIARPGTGGLMPGMPGTRKMPGMPGIDNDNWEMPRTRSIPRGDISGAQTAGRGQSPMFSKSSTLSSKYLPQGSAGLMRNSALVHGGGGPPARPSNYGFGSEPAPQVASPVKAAPPAVSSEKAQAPVVKSDTADLHRKTVSLLEEYFSVRLLDEALQCVEELKSPAYHPEFVKEAISLALDKSPPCVEPVANLIEYLLMKKILVPRDIGTGCLLFGSMIDDIGIDLPKAPNNFGEIIGRLILAGGLDFKVVREVLKKVEDDRFQKVIFDSAMHVISSASGQAVLESQASDIDACRGLFQ* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3045 801 MobiDBLite consensus disorder prediction 115 135 - -
Amo01g3045 801 Pfam MA3 domain 638 749 IPR003891 -
Amo01g3045 801 MobiDBLite consensus disorder prediction 1 43 - -
Amo01g3045 801 SMART ma3_7 637 749 IPR003891 -
Amo01g3045 801 MobiDBLite consensus disorder prediction 113 162 - -
Amo01g3045 801 Pfam MIF4G domain 224 450 IPR003890 GO:0003723|GO:0005515
Amo01g3045 801 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 800 IPR045208 GO:0003743
Amo01g3045 801 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 800 - -
Amo01g3045 801 SMART if4_15 224 450 IPR003890 GO:0003723|GO:0005515
Amo01g3045 801 Gene3D - 631 794 - -
Amo01g3045 801 MobiDBLite consensus disorder prediction 551 568 - -
Amo01g3045 801 ProSiteProfiles MI domain profile. 636 758 IPR003891 -
Amo01g3045 801 MobiDBLite consensus disorder prediction 548 568 - -
Amo01g3045 801 SUPERFAMILY ARM repeat 633 780 IPR016024 -
Amo01g3045 801 Gene3D - 215 451 - -
Amo01g3045 801 MobiDBLite consensus disorder prediction 479 505 - -
Amo01g3045 801 SUPERFAMILY ARM repeat 218 453 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3045 Amo-Chr1 101804286 101809796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3045 1 799 Eukaryotic Initiation Factors Gene Family AT5G57870 66.171 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3045 K03260 - gmx:100781275 1263.44