Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2987 ATGATGGATGTAACTGTAGATGAAGCAGAGACAGATATAATTAATATTGATGGTTTTAAAAAGTTGATAACTGATTTGACCATCGAAGACATACGGGGACTGGTGTTTGATACAAAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCCAGTGCTATGGATTTGTGTCACGAAAAGACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAAGACAATTGGTTTGCAATAAATTAGGAGAAAGACATTGGAAGCACCTTAAAAAGGATAATCGGCAAAGGGAGCGTAGGGCAATTACTCGTGTCAACTGCAGGGCGAGGATTCTCAGTGTCTTTGAGAGTGAACACAATCATCCACTGTGTCCTCCTAAGTACAGACATCTTATTGCCGCGAATCGTGGGCTTAATGAGGCCGATAAAACACAAGCAGACAGCTTGCGAGCATGTGTACTAAGGCATTACCGAAACAACCATCTTACTGTTGACTTTGAAACCTTTTATAAGTTTCCCGTTTTGACTACGTGTTTGAAAAATTTTGAGAAACAAGCTGCTGAACTTTATACTAGAAATATTTTTAAACTTGTGAAAGATGAGATAGAAGCAGCAGGTGCCTTAAATGTGACTGAATACCCAAATAGTGGAGACATTGTTGAGTACAACACGATATCTTACAATAAAGACAAGGACCTGTTTGCGTGTGAGTACAGGCTATTTGAGACTCGTGGATTACTGTGCTCCCACATCCTTGGGGTCTTGAAGCATCGCAATGCAAAATGCACAAGAGATGCAAAGAGTGATTTTATATGCTCAATTGGCGAGCAAGACTCCGCTGATGATATAGTGCCTACACTTAGATGCGGTGCAATGACATCAATTTGTTGGAAGCTTTGTCATATTTCTTCAAAAAATTCAGCCGACTCTAGAAAAATCTCAGGTGATTCAGCTGTTGTGAAGTCAAAAGGGGCTCCAAGAAAGGCTCCAAAAGGCCAAAAGAGGCGAAGATGTTCACATTGTAAGTCAAGCAGGCATCTCATCAAGACATGTCCATTACTCCTCAAGGGGGACTCACTCGTCGAATACTCAAATGCTGAAGATGAACCAATGGTTGAAGAATGTGATGCCAATAAATAG 1134 0.4039 MMDVTVDEAETDIINIDGFKKLITDLTIEDIRGLVFDTKSQVCEFYAKYAQCYGFVSRKDLKTVDANGNINTRQLVCNKLGERHWKHLKKDNRQRERRAITRVNCRARILSVFESEHNHPLCPPKYRHLIAANRGLNEADKTQADSLRACVLRHYRNNHLTVDFETFYKFPVLTTCLKNFEKQAAELYTRNIFKLVKDEIEAAGALNVTEYPNSGDIVEYNTISYNKDKDLFACEYRLFETRGLLCSHILGVLKHRNAKCTRDAKSDFICSIGEQDSADDIVPTLRCGAMTSICWKLCHISSKNSADSRKISGDSAVVKSKGAPRKAPKGQKRRRCSHCKSSRHLIKTCPLLLKGDSLVEYSNAEDEPMVEECDANK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2987 377 Pfam FAR1 DNA-binding domain 44 120 IPR004330 -
Amo01g2987 377 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 146 - -
Amo01g2987 377 MobiDBLite consensus disorder prediction 305 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2987 Amo-Chr1 101304582 101306886 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g2987 FAR1 3.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2987 - - ahf:112778948 379.407