Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2986 ACCCTCTCTCCATTACCATCTTATTCGACGGATCATAATCACAGGGAGGAGGTTGTGCCAACTGCAGAGGAGGAGGTAGTGCCAACTGCACAAGAGGAGGCAGCACCAACAAAGACAGAATATCATTGGACCCAAGATGAACATAGGTTATTTTTTAGAGGGTATCAAGAAGTAAGTTCACACTGGAAAAGAATTTCAGAATATTATGTAAAAACAAAAATTTTTAATCAAATTTCCAGTCATGCTCAGAAATATTTTTTACATAAAAAAGAATTGGCTAAAGAAAAAAAGCTACGAAAAAAAATTGTGCCCTGTTTCGAAGTTTTTAATAGATGGAGGAGAATTTGCTTAAAGGAGAAAGAACATTTGTCCGGCCTTGATGACAATGCCGAAGGAGACGGTGAATTAGATTTTATCTAA 420 0.3667 TLSPLPSYSTDHNHREEVVPTAEEEVVPTAQEEAAPTKTEYHWTQDEHRLFFRGYQEVSSHWKRISEYYVKTKIFNQISSHAQKYFLHKKELAKEKKLRKKIVPCFEVFNRWRRICLKEKEHLSGLDDNAEGDGELDFI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2986 139 Pfam Myb-like DNA-binding domain 43 86 IPR001005 -
Amo01g2986 139 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 90 IPR017930 -
Amo01g2986 139 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 15 95 IPR043363 -
Amo01g2986 139 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 38 89 IPR006447 GO:0003677
Amo01g2986 139 Gene3D - 42 91 - -
Amo01g2986 139 PANTHER - 15 95 - -
Amo01g2986 139 SUPERFAMILY Homeodomain-like 36 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2986 Amo-Chr1 101301490 101303008 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo01g2986 Myb_DNA-binding 3.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2986 - - adu:107463192 157.147